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L3_114_000M1_scaffold_965

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000M1_scaffold_965_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..343
DNA (342bp) protein (114aa)
gatB; Glutamyl-tRNA(Gln) amidotransferase subunit B (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121, ECO:0000256|SAAS:SAAS00222465}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00121};; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3KYQ9_BIFBR
L3_114_000M1_scaffold_965_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

484..1530
DNA (1047bp) protein (349aa)
Acetyltransferase, GNAT family n=4 Tax=Bifidobacterium breve RepID=F6C6X9_BIFBA
GNAT family acetyltransferase
Acetyltransferase, GNAT family {ECO:0000313|EMBL:ERI87999.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L3_114_000M1_scaffold_965_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1537..1851
DNA (315bp) protein (105aa)
Uncharacterized protein n=24 Tax=Bifidobacterium RepID=B3DU29_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK71152.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L3_114_000M1_scaffold_965_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2022..3635
DNA (1614bp) protein (538aa)
Uncharacterized protein n=3 Tax=Bifidobacterium breve RepID=F6C6Y1_BIFBA
Hypothetical protein, possibly FAD-containing oxidoreductase
Uncharacterized protein {ECO:0000313|EMBL:AEF26808.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L3_114_000M1_scaffold_965_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3995..5971
DNA (1977bp) protein (659aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
rho; transcription termination factor Rho (EC:3.6.4.-)
Transcription termination factor Rho n=2 Tax=Bifidobacterium breve RepID=F6C6Y2_BIFBA
L3_114_000M1_scaffold_965_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6124..6546
DNA (423bp) protein (141aa)
Aminotransferase, class IV n=2 Tax=Bifidobacterium breve RepID=F6C6Y3_BIFBA
aminotransferase, class IV domain protein
Aminotransferase, class IV {ECO:0000313|EMBL:AEF27766.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L3_114_000M1_scaffold_965_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6539..7705)
DNA (1167bp) protein (389aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZIF1_BIFBR
transposase
Uncharacterized protein {ECO:0000313|EMBL:EPD76563.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L3_114_000M1_scaffold_965_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8201..9076
DNA (876bp) protein (292aa)
Transcriptional regulator, AraC family n=5 Tax=Bifidobacterium breve RepID=F6C6Y4_BIFBA
Transcriptional regulator, AraC family
Transcriptional regulator, AraC family {ECO:0000313|EMBL:AHJ20511.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L3_114_000M1_scaffold_965_9
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9338..10660
DNA (1323bp) protein (441aa)
ABC transporter, solute-binding protein n=5 Tax=Bifidobacterium breve RepID=F6C6Y5_BIFBA
Solute-binding protein of ABC transporter system for sugars, galactan metabolism
Solute-binding protein of ABC transporter system for sugars, galactan metabolism {ECO:0000313|EMBL:AHJ20512.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L3_114_000M1_scaffold_965_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10760..11650
DNA (891bp) protein (297aa)
ABC transporter, permease protein n=4 Tax=Bifidobacterium breve RepID=F6C6Y6_BIFBA
Permease protein of ABC transporter system
Permease protein of ABC transporter system {ECO:0000313|EMBL:AHJ20513.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L3_114_000M1_scaffold_965_11
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11652..12521
DNA (870bp) protein (290aa)
ABC transporter, permease protein n=4 Tax=Bifidobacterium breve RepID=F6C6Y7_BIFBA
Sugar ABC transporter, permease protein
Uncharacterized protein {ECO:0000313|EMBL:EPD76567.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L3_114_000M1_scaffold_965_12
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12564..14366
DNA (1803bp) protein (601aa)
Uncharacterized protein n=3 Tax=Bifidobacterium breve RepID=D4BM94_BIFBR
Alpha-galactosidase
Alpha-galactosidase {ECO:0000313|EMBL:AHJ18601.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L3_114_000M1_scaffold_965_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14444..14647
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S3AJP9_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD76569.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
putative transposase
L3_114_000M1_scaffold_965_14
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14705..15004
DNA (300bp) protein (100aa)
Transposase n=4 Tax=Bifidobacterium dentium RepID=D2Q6F2_BIFDB
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHJ18602.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L3_114_000M1_scaffold_965_15
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15286..15705
DNA (420bp) protein (140aa)
branched-chain amino acid aminotransferase (EC:4.1.3.38)
Uncharacterized protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CBV2_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:ERI87979.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L3_114_000M1_scaffold_965_16
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15745..16134
DNA (390bp) protein (130aa)
chorismate mutase (EC:5.4.99.5)
Chorismate mutase {ECO:0000313|EMBL:AEF27967.1}; EC=5.4.99.5 {ECO:0000313|EMBL:AEF27967.1};; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
Chorismate mutase n=2 Tax=Bifidobacterium breve RepID=F6C6Y9_BIFBA
L3_114_000M1_scaffold_965_17
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16281..18266
DNA (1986bp) protein (662aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E6B0_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:ERI87981.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
putative secreted protein
L3_114_000M1_scaffold_965_18
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(18299..20971)
DNA (2673bp) protein (891aa)
Valine--tRNA ligase {ECO:0000256|SAAS:SAAS00105779}; EC=6.1.1.9 {ECO:0000256|SAAS:SAAS00105779};; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
Valine--tRNA ligase n=1 Tax=Bifidobacterium breve HPH0326 RepID=S3A2Y4_BIFBR
valS; Valyl-tRNA synthetase
L3_114_000M1_scaffold_965_19
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21092..22627)
DNA (1536bp) protein (512aa)
ABC transporter substrate-binding protein n=1 Tax=Bifidobacterium breve RepID=UPI000374171C
Solute binding protein of ABC transporter system for peptides
Solute binding protein of ABC transporter system for peptides {ECO:0000313|EMBL:AHJ20519.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L3_114_000M1_scaffold_965_20
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22656..23324)
DNA (669bp) protein (223aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
endonuclease III n=1 Tax=Bifidobacterium breve RepID=UPI0002E044A2
Endonuclease III
L3_114_000M1_scaffold_965_21
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23349..24119)
DNA (771bp) protein (257aa)
transcriptional regulator n=1 Tax=Bifidobacterium breve RepID=UPI00031E1E35
Transcriptional regulatory protein glnR
Transcriptional regulatory protein glnR {ECO:0000313|EMBL:AHJ20521.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L3_114_000M1_scaffold_965_22
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24292..24996)
DNA (705bp) protein (235aa)
membrane protein n=1 Tax=Bifidobacterium breve RepID=UPI000318C2E9
putative membrane spanning protein
Putative membrane spanning protein {ECO:0000313|EMBL:AHJ20522.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L3_114_000M1_scaffold_965_23
Bifidobacterium reuteri, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25056..25634)
DNA (579bp) protein (193aa)
Putative manganese efflux pump MntP n=18 Tax=Bifidobacterium RepID=MNTP_BIFLD
Putative manganese efflux pump MntP {ECO:0000256|HAMAP-Rule:MF_01521}; TaxID=1437610 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium reuteri DSM 23975.;"
hypothetical protein
L3_114_000M1_scaffold_965_24
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25870..26364)
DNA (495bp) protein (165aa)
Inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00209}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_00209};; Pyrophosphate phospho-hydrolase {ECO:0000256|HAMAP-Rule:MF_00209}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
Inorganic pyrophosphatase n=2 Tax=Bifidobacterium breve RepID=F9Y116_BIFBU
Inorganic pyrophosphatase
L3_114_000M1_scaffold_965_25
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26450..28717)
DNA (2268bp) protein (756aa)
Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase {ECO:0000256|HAMAP-Rule:MF_02124}; Short=GMPMT {ECO:0000256|HAMAP-Rule:MF_02124};; EC=2.4.99.16 {ECO:0000256|HAMAP-Rule:MF_02124};; (1->4)-alpha-D-glucan:maltose-1-phosphate alpha-D-maltosyltransferase {ECO:0000256|HAMAP-Rule:MF_02124}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CBW1_BIFBR
Alpha-amylase family protein
L3_114_000M1_scaffold_965_26
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28952..30850
DNA (1899bp) protein (633aa)
Conserved hypothetical secreted protein with prokaryotic membrane lipoprotein lipid attachment site and Gram-positive cocci surface proteins LPxTG motif profile n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9Y118_BIFBU
putative secreted protein with prokaryotic membrane lipoprotein lipid attachment site and Gram-positive cocci surface proteins LPxTG motif profile
LPXTG-motif cell wall anchor domain protein {ECO:0000313|EMBL:EFE89925.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L3_114_000M1_scaffold_965_27
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31165..32241
DNA (1077bp) protein (359aa)
Homoserine O-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084556}; EC=2.3.1.46 {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084596};; Homoserine O-transsuccinylase {ECO:0000256|HAMAP-Rule:MF_00295}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
Homoserine O-succinyltransferase n=2 Tax=Bifidobacterium breve RepID=U2CUK3_BIFBR
Homoserine O-succinyltransferase
L3_114_000M1_scaffold_965_28
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32586..33395
DNA (810bp) protein (270aa)
ATP synthase subunit a n=4 Tax=Bifidobacterium breve RepID=F6C701_BIFBA
ATP synthase A chain
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L3_114_000M1_scaffold_965_29
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33618..34136
DNA (519bp) protein (173aa)
atpF; ATP synthase B chain (EC:3.6.3.14)
ATP synthase subunit b n=2 Tax=Bifidobacterium breve RepID=F9Y1C3_BIFBU
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398, ECO:0000256|RuleBase:RU003849}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L3_114_000M1_scaffold_965_30
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34171..34839
DNA (669bp) protein (223aa)
ATP synthase subunit delta n=2 Tax=Bifidobacterium breve RepID=F9Y1C4_BIFBU
ATP synthase delta chain
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
Displaying items 1-30 of 31 in total

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