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L3_114_000M1_scaffold_985

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000M1_scaffold_985_1
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(71..871)
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B6G6_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN76499.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
L3_114_000M1_scaffold_985_2
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(961..2343)
DNA (1383bp) protein (461aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TUT4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67029.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L3_114_000M1_scaffold_985_3
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2615..3013)
DNA (399bp) protein (133aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_58FAA RepID=F7JU79_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN49483.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_114_000M1_scaffold_985_4
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3061..3432)
DNA (372bp) protein (124aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B6FPX2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EGN49485.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_114_000M1_scaffold_985_5
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3461..3883)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FPX3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA81910.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L3_114_000M1_scaffold_985_6
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3873..5375)
DNA (1503bp) protein (501aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_58FAA RepID=F7JU83_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN49487.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Site-specific recombinase XerD
L3_114_000M1_scaffold_985_7
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5356..7335)
DNA (1980bp) protein (660aa)
Site-specific recombinase, phage integrase family n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FPX5_9CLOT
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EEA81912.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Site-specific recombinase XerD
L3_114_000M1_scaffold_985_8
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7350..8468)
DNA (1119bp) protein (373aa)
Site-specific recombinase, phage integrase family n=2 Tax=Clostridiales RepID=B6FPX6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EGN49489.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Site-specific recombinase XerD
L3_114_000M1_scaffold_985_9
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8636..10609)
DNA (1974bp) protein (658aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_58FAA RepID=F7JU85_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN49490.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Rad3-related DNA helicases
L3_114_000M1_scaffold_985_10
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11202..11639)
DNA (438bp) protein (146aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FPX9_9CLOT
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:EEA81917.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Sigma-70, region 4.
L3_114_000M1_scaffold_985_11
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12047..12373
DNA (327bp) protein (109aa)
DNA-binding helix-turn-helix protein n=2 Tax=Clostridiales RepID=B6FPY1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EGN49492.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
helix-turn-helix domain-containing protein
L3_114_000M1_scaffold_985_12
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12477..12812)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FPY2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA81919.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L3_114_000M1_scaffold_985_13
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13026..13277
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FPY3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA81920.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Helix-turn-helix.
L3_114_000M1_scaffold_985_14
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13309..13650)
DNA (342bp) protein (114aa)
Transcriptional regulatory protein, C-terminal domain protein (Fragment) n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FPY5_9CLOT
Transcriptional regulatory protein, C-terminal domain protein {ECO:0000313|EMBL:EEA81902.1}; Flags: Fragment;; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
two component transcriptional regulator, winged helix family
L3_114_000M1_scaffold_985_15
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13772..14956)
DNA (1185bp) protein (395aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FPY6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA81903.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L3_114_000M1_scaffold_985_16
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15013..16215)
DNA (1203bp) protein (401aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FPY7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA81904.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L3_114_000M1_scaffold_985_17
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16239..18320)
DNA (2082bp) protein (694aa)
Putative uncharacterized protein n=2 Tax=Clostridiales RepID=F7JU92_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN49497.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Cell division protein FtsI/penicillin-binding protein 2
L3_114_000M1_scaffold_985_18
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18451..18840
DNA (390bp) protein (130aa)
Transcriptional regulator, BlaI/MecI/CopY family n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FPZ0_9CLOT
Transcriptional regulator, BlaI/MecI/CopY family {ECO:0000313|EMBL:EEA81900.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
penicillinase repressor
L3_114_000M1_scaffold_985_19
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18840..20552
DNA (1713bp) protein (571aa)
Beta-lactamase (EC:3.5.2.6)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_58FAA RepID=F7JU94_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN49499.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L3_114_000M1_scaffold_985_20
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20712..21638
DNA (927bp) protein (309aa)
Penicillin-binding protein, transpeptidase domain protein n=2 Tax=Clostridiales RepID=B6FPZ3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EGN49500.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Beta-lactamase class D
L3_114_000M1_scaffold_985_21
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21666..21842)
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FPZ4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA81881.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L3_114_000M1_scaffold_985_22
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21913..22755)
DNA (843bp) protein (281aa)
Ser/Thr phosphatase family protein n=2 Tax=Clostridiales RepID=B6FPZ5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EGN49501.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Ser/Thr protein phosphatase family protein
L3_114_000M1_scaffold_985_23
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23082..24566)
DNA (1485bp) protein (495aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_58FAA RepID=F7JU97_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN49502.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_114_000M1_scaffold_985_24
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24761..25294)
DNA (534bp) protein (178aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B6FPZ8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EGN49503.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L3_114_000M1_scaffold_985_25
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25296..25826)
DNA (531bp) protein (177aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B6FPZ9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EGN49504.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L3_114_000M1_scaffold_985_26
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25857..28610)
DNA (2754bp) protein (918aa)
Penicillin-binding protein, transpeptidase domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FQ00_9CLOT
Penicillin-binding protein, transpeptidase domain protein {ECO:0000313|EMBL:EEA81887.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
pbpA1; penicillin-binding protein PbpA1
L3_114_000M1_scaffold_985_27
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28702..29679)
DNA (978bp) protein (326aa)
D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FQ02_9CLOT
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:EEA81889.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L3_114_000M1_scaffold_985_28
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30078..31259)
DNA (1182bp) protein (394aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FQ03_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA81890.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L3_114_000M1_scaffold_985_29
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31685..33367)
DNA (1683bp) protein (561aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_58FAA RepID=F7JUA4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN49509.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
CHAP domain.
L3_114_000M1_scaffold_985_30
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33415..33759)
DNA (345bp) protein (115aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B6FQ06_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EGN49510.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Domain of unknown function (DUF955).
Displaying items 1-30 of 36 in total

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