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L3_114_000M1_scaffold_3412

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000M1_scaffold_3412_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(3..890)
DNA (888bp) protein (296aa)
RiBF n=9 Tax=Bifidobacterium RepID=E4R3C2_BIFLM
ribF; ribf
FAD synthase {ECO:0000313|EMBL:AIW44244.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L3_114_000M1_scaffold_3412_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(988..2151)
DNA (1164bp) protein (388aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
tRNA pseudouridine synthase B n=1 Tax=Bifidobacterium sp. 12_1_47BFAA RepID=E5XX93_9BIFI
truB; trub
L3_114_000M1_scaffold_3412_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(2153..2626)
DNA (474bp) protein (158aa)
Ribosome-binding factor A n=16 Tax=Bifidobacterium RepID=RBFA_BIFLD
ribosome-binding factor
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L3_114_000M1_scaffold_3412_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(2778..5705)
DNA (2928bp) protein (976aa)
Translation initiation factor IF-2 n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8ASH2_BIFLN
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
translation initiation factor IF-2
L3_114_000M1_scaffold_3412_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(5975..7042)
DNA (1068bp) protein (356aa)
Transcription termination factor NusA n=10 Tax=Bifidobacterium longum RepID=D6DC34_BIFLN
transcription elongation factor NusA
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L3_114_000M1_scaffold_3412_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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7271..7978
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum CECT 7347 RepID=T2I2X9_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:CCK35637.1}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
hypothetical protein
L3_114_000M1_scaffold_3412_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8127..8567
DNA (441bp) protein (147aa)
Transposase for IS3509a n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZUL2_BIFLJ
IS3509a transposase {ECO:0000313|EMBL:KFI72918.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
transposase
L3_114_000M1_scaffold_3412_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8696..9493)
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5EDB6_BIFLI
M protein E1 {ECO:0000313|EMBL:KFI71304.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
hypothetical protein
L3_114_000M1_scaffold_3412_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9528..9623)
DNA (96bp) protein (32aa)
Transglutaminase-like protein n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GV83_BIFLN
hypothetical protein
Transglutaminase-like superfamily protein {ECO:0000313|EMBL:CCK35640.1}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
Displaying 9 items

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