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L3_114_000M1_scaffold_1106

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Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000M1_scaffold_1106_1
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..763
DNA (762bp) protein (254aa)
Succinylglutamate desuccinylase/aspartoacylase family protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5ISG1_9CLOT
Succinylglutamate desuccinylase/aspartoacylase family protein {ECO:0000313|EMBL:CCY43239.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Predicted deacylase
L3_114_000M1_scaffold_1106_2
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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933..1280
DNA (348bp) protein (116aa)
Transcriptional regulator, ArsR family n=2 Tax=Eubacterium RepID=C0ETC5_9FIRM
Transcriptional regulator ArsR family {ECO:0000313|EMBL:CDB17889.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
transcriptional regulator, ArsR family
L3_114_000M1_scaffold_1106_3
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1277..2614
DNA (1338bp) protein (446aa)
MATE efflux family protein n=2 Tax=Eubacterium RepID=C0ETC4_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:CDB17890.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
MATE efflux family protein
L3_114_000M1_scaffold_1106_4
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2633..4090)
DNA (1458bp) protein (486aa)
Transporter, SSS family n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EHP6_9FIRM
Transporter, SSS family {ECO:0000313|EMBL:EEQ57731.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Na+/solute symporter
L3_114_000M1_scaffold_1106_5
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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4234..4941
DNA (708bp) protein (236aa)
LytTr DNA-binding domain protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EHP5_9FIRM
LytTr DNA-binding domain protein {ECO:0000313|EMBL:EEQ57730.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
LytTR family two component transcriptional regulator
L3_114_000M1_scaffold_1106_6
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4957..6267
DNA (1311bp) protein (437aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HPS0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE96657.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
signal transduction histidine kinase regulating citrate/malate metabolism
L3_114_000M1_scaffold_1106_7
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6264..7028)
DNA (765bp) protein (255aa)
Putative uridine phosphorylase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EM61_9FIRM
Putative uridine phosphorylase {ECO:0000313|EMBL:EEQ59029.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
purine or other phosphorylase family 1
L3_114_000M1_scaffold_1106_8
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7055..7831)
DNA (777bp) protein (259aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HMY0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE97151.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
purine or other phosphorylase family 1
L3_114_000M1_scaffold_1106_9
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7832..8770)
DNA (939bp) protein (313aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HMX9_9CLOT
Beta-methylgalactoside transporter inner membrane component {ECO:0000313|EMBL:KJJ77518.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
inner-membrane translocator
L3_114_000M1_scaffold_1106_10
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8767..9846)
DNA (1080bp) protein (360aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HMX8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE97149.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
inner-membrane translocator
L3_114_000M1_scaffold_1106_11
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9836..11392)
DNA (1557bp) protein (519aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EM65_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEQ59033.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
ABC transporter
L3_114_000M1_scaffold_1106_12
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11517..12701)
DNA (1185bp) protein (395aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HMX6_9CLOT
Membrane lipoprotein TmpC {ECO:0000313|EMBL:KJJ77515.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
basic membrane lipoprotein
L3_114_000M1_scaffold_1106_13
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12770..12931)
DNA (162bp) protein (54aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HMX5_9CLOT
Putative HTH-type transcriptional regulator YurK {ECO:0000313|EMBL:KJJ77514.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
L3_114_000M1_scaffold_1106_14
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12928..13515)
DNA (588bp) protein (196aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HMX5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE97146.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
GntR family transcriptional regulator
L3_114_000M1_scaffold_1106_15
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13519..14283)
DNA (765bp) protein (255aa)
Putative uridine phosphorylase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EM68_9FIRM
Putative uridine phosphorylase {ECO:0000313|EMBL:EEQ59036.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
purine or other phosphorylase family 1
L3_114_000M1_scaffold_1106_16
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14345..15319)
DNA (975bp) protein (325aa)
Inosine-uridine preferring nucleoside hydrolase {ECO:0000313|EMBL:EEQ59038.1}; EC=3.2.2.1 {ECO:0000313|EMBL:EEQ59038.1};; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Inosine-uridine preferring nucleoside hydrolase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EM70_9FIRM
inosine/uridine-preferring nucleoside hydrolase
L3_114_000M1_scaffold_1106_17
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15476..16375)
DNA (900bp) protein (300aa)
Tagatose-6-phosphate kinase {ECO:0000256|PIRNR:PIRNR000535}; EC=2.7.1.144 {ECO:0000256|PIRNR:PIRNR000535};; TaxID=1330534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolvens C7.;"
Ribokinase n=1 Tax=Clostridium papyrosolvens C7 RepID=U4QZX2_9CLOT
ribokinase
L3_114_000M1_scaffold_1106_18
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16487..18889)
DNA (2403bp) protein (801aa)
1,4-alpha-glucan branching enzyme GlgB {ECO:0000256|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000256|HAMAP-Rule:MF_00685};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase {ECO:0000256|HAMAP-Rule:MF_00685}; Alpha-(1->4)-glucan branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; Glycogen branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
glycogen branching enzyme (EC:2.4.1.18)
1,4-alpha-glucan branching enzyme GlgB n=1 Tax=Clostridium sp. M62/1 RepID=D4CH23_9CLOT
L3_114_000M1_scaffold_1106_19
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19007..20182)
DNA (1176bp) protein (392aa)
Tat pathway signal sequence domain protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CTZ9_9CLOT
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EEG57424.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
hypothetical protein
L3_114_000M1_scaffold_1106_20
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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20417..21748
DNA (1332bp) protein (444aa)
Potassium uptake protein KtrB n=2 Tax=unclassified Lachnospiraceae RepID=E5XHJ8_9FIRM
Potassium uptake protein KtrB {ECO:0000313|EMBL:EFV19163.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
Trk-type K+ transport systems, membrane components
L3_114_000M1_scaffold_1106_21
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

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21768..22415
DNA (648bp) protein (216aa)
K+ transport systems, NAD-binding component n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GRW0_9FIRM
K+ transport systems, NAD-binding component
K+ transport systems, NAD-binding component {ECO:0000313|EMBL:CBL40535.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_114_000M1_scaffold_1106_22
unknown

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22435..22608
DNA (174bp) protein (58aa)

This feature has no annotations

L3_114_000M1_scaffold_1106_23
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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22678..24687
DNA (2010bp) protein (670aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
Osmosensitive K+ channel histidine kinase (EC:2.7.13.3)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium sp. CAG:169 RepID=R6BNL0_9CLOT
L3_114_000M1_scaffold_1106_24
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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24680..25378
DNA (699bp) protein (233aa)
Two-component system, OmpR family, KDP operon response regulator KdpE n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XH21_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:CDA06457.1}; TaxID=1262756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:257.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_114_000M1_scaffold_1106_25
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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25490..25849
DNA (360bp) protein (120aa)
Cupin domain protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5INS4_9CLOT
Cupin domain protein {ECO:0000313|EMBL:CCY43740.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Cupin domain.
L3_114_000M1_scaffold_1106_26
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25928..26326)
DNA (399bp) protein (133aa)
ATP synthase epsilon chain n=2 Tax=Clostridium RepID=D3AR43_9CLOT
ATP synthase epsilon chain {ECO:0000256|HAMAP-Rule:MF_00530}; ATP synthase F1 sector epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; F-ATPase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
ATP synthase F1 subunit epsilon
L3_114_000M1_scaffold_1106_27
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(26338..27729)
DNA (1392bp) protein (464aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
ATP synthase subunit beta n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IA58_9CLOT
ATP synthase F1 subunit beta
L3_114_000M1_scaffold_1106_28
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(27815..28678)
DNA (864bp) protein (288aa)
ATP synthase gamma chain n=1 Tax=Clostridium hathewayi 12489931 RepID=N9X4C3_9CLOT
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
ATP synthase F1 subunit gamma
L3_114_000M1_scaffold_1106_29
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(28698..30200)
DNA (1503bp) protein (501aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
ATP synthase F1 subcomplex alpha subunit (EC:3.6.3.14)
ATP synthase subunit alpha n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IA56_9CLOT
L3_114_000M1_scaffold_1106_30
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(30222..30770)
DNA (549bp) protein (183aa)
ATP synthase subunit delta n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TQ09_9CLOT
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
ATP synthase F1 subunit delta
Displaying items 1-30 of 32 in total

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