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L3_114_000M1_scaffold_1335

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000M1_scaffold_1335_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(378..1526)
DNA (1149bp) protein (383aa)
Peptidase dimerization domain protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZJ11_9FIRM
Peptidase dimerization domain protein {ECO:0000313|EMBL:EFQ06853.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
peptidase M20
L3_114_000M1_scaffold_1335_2
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1595..3067)
DNA (1473bp) protein (491aa)
Glycosyl hydrolase, family 1 n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D4H6_9CLOT
Glycosyl hydrolase, family 1 {ECO:0000313|EMBL:EEG53765.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
beta-glucosidase
L3_114_000M1_scaffold_1335_3
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3082..4461)
DNA (1380bp) protein (460aa)
bglP; PTS system, beta-glucoside-specific IIABC component family protein (EC:2.7.1.69)
Phosphotransferase system, EIIC n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D4H7_9CLOT
Phosphotransferase system, EIIC {ECO:0000313|EMBL:EEG53766.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
L3_114_000M1_scaffold_1335_4
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4655..5647
DNA (993bp) protein (331aa)
Transcriptional regulator, AraC family n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D4H9_9CLOT
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EEG53768.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
L3_114_000M1_scaffold_1335_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5712..5963)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H8A2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU95862.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
L3_114_000M1_scaffold_1335_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6454..7476
DNA (1023bp) protein (341aa)
Threonine aldolase (EC:4.1.2.5)
Beta-eliminating lyase n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SH61_9FIRM
Beta-eliminating lyase {ECO:0000313|EMBL:EDP20468.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L3_114_000M1_scaffold_1335_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7657..8682)
DNA (1026bp) protein (342aa)
Predicted dehydrogenases and related proteins n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K7D0_9FIRM
Predicted dehydrogenases and related proteins
Predicted dehydrogenases and related proteins {ECO:0000313|EMBL:CBL00743.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L3_114_000M1_scaffold_1335_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8675..9799)
DNA (1125bp) protein (375aa)
Predicted dehydrogenases and related proteins n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K7C9_9FIRM
Predicted dehydrogenases and related proteins
Predicted dehydrogenases and related proteins {ECO:0000313|EMBL:CBL00742.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L3_114_000M1_scaffold_1335_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10071..11018)
DNA (948bp) protein (316aa)
CobW/P47K family protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SH57_9FIRM
Putative GTPases (G3E family)
CobW/P47K family protein {ECO:0000313|EMBL:EDP20465.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L3_114_000M1_scaffold_1335_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11080..14115)
DNA (3036bp) protein (1012aa)
Diguanylate cyclase (GGDEF) domain n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K7C7_9FIRM
Diguanylate cyclase (GGDEF) domain {ECO:0000313|EMBL:CBL00740.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
diguanylate cyclase (GGDEF) domain
L3_114_000M1_scaffold_1335_11
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14150..15646)
DNA (1497bp) protein (499aa)
Carbohydrate ABC transporter substrate-binding protein CUT1 family (TC 3.A.1.1.-) n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I8W9_9FIRM
Carbohydrate ABC transporter substrate-binding protein CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CDE48304.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
L3_114_000M1_scaffold_1335_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15946..16497)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SH54_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP20462.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
hypothetical protein
L3_114_000M1_scaffold_1335_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16594..17112)
DNA (519bp) protein (173aa)
Predicted small molecule binding protein (Contains 3H domain) n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K7C6_9FIRM
Predicted small molecule binding protein (contains 3H domain)
Predicted small molecule binding protein (Contains 3H domain) {ECO:0000313|EMBL:CBL00739.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L3_114_000M1_scaffold_1335_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17413..18768)
DNA (1356bp) protein (452aa)
Glycosidases n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K7C5_9FIRM
Glycosidases
Glycosidases {ECO:0000313|EMBL:CBL00738.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L3_114_000M1_scaffold_1335_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19005..20960
DNA (1956bp) protein (652aa)
1,4-alpha-glucan branching enzyme {ECO:0000256|SAAS:SAAS00046836}; EC=2.4.1.18 {ECO:0000256|SAAS:SAAS00046836};; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase (EC:2.4.1.18)
1,4-alpha-glucan branching enzyme n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SH49_9FIRM
L3_114_000M1_scaffold_1335_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21096..23009
DNA (1914bp) protein (638aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SH47_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP20456.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
hypothetical protein
L3_114_000M1_scaffold_1335_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23043..24017
DNA (975bp) protein (325aa)
Trigger factor {ECO:0000313|EMBL:EDP20455.1}; EC=5.2.1.8 {ECO:0000313|EMBL:EDP20455.1};; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Trigger factor n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SH46_9FIRM
trigger factor
L3_114_000M1_scaffold_1335_18
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24022..25335
DNA (1314bp) protein (438aa)
4Fe-4S binding domain protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SH45_9FIRM
4Fe-4S binding domain protein {ECO:0000313|EMBL:EDP20454.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
hypothetical protein
L3_114_000M1_scaffold_1335_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25613..27637
DNA (2025bp) protein (675aa)
Tat pathway signal sequence domain protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZLD5_9FIRM
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EFQ05975.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
ABC-type oligopeptide transport system, periplasmic component
L3_114_000M1_scaffold_1335_20
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28401..29342
DNA (942bp) protein (314aa)
ABC transporter, permease protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZLD6_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:EFQ05976.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
L3_114_000M1_scaffold_1335_21
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29342..30364
DNA (1023bp) protein (341aa)
ABC transporter, permease protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZLD7_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:EFQ05977.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
L3_114_000M1_scaffold_1335_22
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30377..31378
DNA (1002bp) protein (334aa)
ABC transporter, ATP-binding protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZLD8_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFQ05978.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
L3_114_000M1_scaffold_1335_23
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31380..32312
DNA (933bp) protein (311aa)
ATPase components of various ABC-type transport systems, contain duplicated ATPase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K134_9FIRM
ATPase components of various ABC-type transport systems, contain duplicated ATPase
ATPase components of various ABC-type transport systems, contain duplicated ATPase {ECO:0000313|EMBL:CBK99983.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_114_000M1_scaffold_1335_24
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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32803..34530
DNA (1728bp) protein (576aa)
Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II (EC:6.2.1.3)
Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II {ECO:0000313|EMBL:CBL00733.1}; EC=6.2.1.3 {ECO:0000313|EMBL:CBL00733.1};; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K7C0_9FIRM
L3_114_000M1_scaffold_1335_25
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34675..35727
DNA (1053bp) protein (351aa)
GDSL-like Lipase/Acylhydrolase n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K7B9_9FIRM
GDSL-like Lipase/Acylhydrolase.
GDSL-like Lipase/Acylhydrolase {ECO:0000313|EMBL:CBL00732.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L3_114_000M1_scaffold_1335_26
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35761..36144)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SH40_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP20450.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Mn-dependent transcriptional regulator
L3_114_000M1_scaffold_1335_27
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36277..36432)
DNA (156bp) protein (52aa)
Uncharacterized protein n=2 Tax=Faecalibacterium prausnitzii RepID=A8SH39_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL00730.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L3_114_000M1_scaffold_1335_28
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36457..38643)
DNA (2187bp) protein (729aa)
Ferrous iron transporter FeoB n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K7B6_9FIRM
Ferrous iron transporter FeoB {ECO:0000313|EMBL:CBL00729.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
ferrous iron transporter FeoB
L3_114_000M1_scaffold_1335_29
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(38674..38895)
DNA (222bp) protein (74aa)
Fe2+ transport system protein A n=2 Tax=Faecalibacterium prausnitzii RepID=D4K7B5_9FIRM
Fe2+ transport system protein A
FeoA domain protein {ECO:0000313|EMBL:EDP20447.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L3_114_000M1_scaffold_1335_30
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(38948..39163)
DNA (216bp) protein (72aa)
Fe2+ transport system protein A n=2 Tax=Faecalibacterium prausnitzii RepID=D4K7B4_9FIRM
FeoA domain protein {ECO:0000313|EMBL:EDP20446.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Fe2+ transport system protein A
Displaying 30 items

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