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L3_114_000M1_scaffold_1619

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000M1_scaffold_1619_1
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..268
DNA (267bp) protein (89aa)
amidohydrolase (EC:3.5.1.14)
Amidohydrolase n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GSI4_9FIRM
Amidohydrolase {ECO:0000313|EMBL:CCY11338.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
L3_114_000M1_scaffold_1619_2
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(456..1943)
DNA (1488bp) protein (496aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
Signal transduction histidine kinase n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GSI5_9FIRM
Signal transduction histidine kinase
L3_114_000M1_scaffold_1619_3
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1940..2665)
DNA (726bp) protein (242aa)
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GSI6_9FIRM
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain {ECO:0000313|EMBL:CBL40771.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_114_000M1_scaffold_1619_4
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

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2981..3463
DNA (483bp) protein (161aa)
Putative uncharacterized protein n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GSI7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL40772.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_114_000M1_scaffold_1619_5
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3475..3702
DNA (228bp) protein (76aa)
Putative uncharacterized protein n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GSI8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOQ37354.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
L3_114_000M1_scaffold_1619_6
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3996..5201)
DNA (1206bp) protein (402aa)
Sodium/proton antiporter CPA1 family (TC 2.A.36) n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7L485_9FIRM
Sodium/proton antiporter CPA1 family (TC 2.A.36) {ECO:0000313|EMBL:CDE82801.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
sodium/proton antiporter, CPA1 family (TC 2.A.36)
L3_114_000M1_scaffold_1619_7
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5428..5880)
DNA (453bp) protein (151aa)
Lactoylglutathione lyase and related lyases n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LIT1_9FIRM
Lactoylglutathione lyase and related lyases
Lactoylglutathione lyase and related lyases {ECO:0000313|EMBL:CBL19742.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L3_114_000M1_scaffold_1619_8
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5933..6310)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6T7C9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF38807.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
hypothetical protein
L3_114_000M1_scaffold_1619_9
Peptostreptococcaceae bacterium ACC19a, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6344..7105)
DNA (762bp) protein (254aa)
Putative uncharacterized protein n=1 Tax=Eubacteriaceae bacterium ACC19a RepID=G9X3D0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL10672.1}; TaxID=796937 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium ACC19a.;"
hypothetical protein
L3_114_000M1_scaffold_1619_10
unknown

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comp(7134..7280)
DNA (147bp) protein (49aa)

This feature has no annotations

L3_114_000M1_scaffold_1619_11
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7335..7556)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JBQ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77202.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_114_000M1_scaffold_1619_12
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7587..7775)
DNA (189bp) protein (63aa)
Putative uncharacterized protein n=1 Tax=Coprococcus catus GD/7 RepID=D4JA38_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK81209.1}; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
L3_114_000M1_scaffold_1619_13
Clostridium sp. CAG:411, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7798..8175)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:411 RepID=R7I310_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE46035.1}; TaxID=1262802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:411.;"
hypothetical protein
L3_114_000M1_scaffold_1619_14
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8466..8696)
DNA (231bp) protein (77aa)
Uncharacterized conserved protein n=1 Tax=Eubacterium rectale M104/1 RepID=D4JIL8_9FIRM
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:CBK93465.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L3_114_000M1_scaffold_1619_15
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8716..9189)
DNA (474bp) protein (158aa)
Uncharacterized conserved protein n=2 Tax=Eubacterium rectale RepID=D6E2N5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR77090.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_114_000M1_scaffold_1619_16
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9267..9479)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6VS85_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD01483.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
L3_114_000M1_scaffold_1619_17
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9683..10477)
DNA (795bp) protein (265aa)
Predicted transcriptional regulators n=1 Tax=Clostridium sp. CAG:81 RepID=R5G624_9CLOT
Predicted transcriptional regulators {ECO:0000313|EMBL:CCY11339.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
Predicted transcriptional regulators
L3_114_000M1_scaffold_1619_18
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10697..12097
DNA (1401bp) protein (467aa)
Predicted membrane protein n=1 Tax=Clostridium sp. CAG:81 RepID=R5G1Y6_9CLOT
Predicted membrane protein {ECO:0000313|EMBL:CCY11340.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
Predicted membrane protein
L3_114_000M1_scaffold_1619_19
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12147..13280
DNA (1134bp) protein (378aa)
Imidazolonepropionase and related amidohydrolases n=1 Tax=Clostridium sp. CAG:81 RepID=R5GFM4_9CLOT
Imidazolonepropionase and related amidohydrolases {ECO:0000313|EMBL:CCY11341.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
Imidazolonepropionase and related amidohydrolases
L3_114_000M1_scaffold_1619_20
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13274..14692
DNA (1419bp) protein (473aa)
Predicted membrane protein n=1 Tax=Clostridium sp. CAG:81 RepID=R5GEX3_9CLOT
Predicted membrane protein {ECO:0000313|EMBL:CCY11342.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
Predicted membrane protein
L3_114_000M1_scaffold_1619_21
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14972..16561
DNA (1590bp) protein (530aa)
Putative membrane protein n=1 Tax=Clostridium sp. CAG:81 RepID=R5G2I1_9CLOT
Putative membrane protein {ECO:0000313|EMBL:CCY11343.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
hypothetical protein
L3_114_000M1_scaffold_1619_22
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16570..17259
DNA (690bp) protein (230aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R5G629_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCY11344.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
L3_114_000M1_scaffold_1619_23
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17503..18801
DNA (1299bp) protein (433aa)
Hemolysins and related proteins containing CBS domains n=1 Tax=Clostridium sp. CAG:81 RepID=R5G1Z1_9CLOT
Hemolysins and related proteins containing CBS domains {ECO:0000313|EMBL:CCY11345.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
Hemolysins and related proteins containing CBS domains
L3_114_000M1_scaffold_1619_24
unknown

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18907..19065
DNA (159bp) protein (53aa)

This feature has no annotations

L3_114_000M1_scaffold_1619_25
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19134..20261
DNA (1128bp) protein (376aa)
sodium ion-translocating decarboxylase, beta subunit (EC:4.1.1.3)
Sodium ion-translocating decarboxylase beta subunit n=1 Tax=Clostridium sp. CAG:81 RepID=R5GFM8_9CLOT
Sodium ion-translocating decarboxylase beta subunit {ECO:0000313|EMBL:CCY11346.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
L3_114_000M1_scaffold_1619_26
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20210..20698)
DNA (489bp) protein (163aa)
Putative uncharacterized protein n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GSJ8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL40784.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_114_000M1_scaffold_1619_27
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21438..22844
DNA (1407bp) protein (469aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:81 RepID=R5G1Z6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY11350.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
radical SAM protein
L3_114_000M1_scaffold_1619_28
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22986..25226
DNA (2241bp) protein (747aa)
Protein translocase subunit secF/protein translocase subunit secD n=1 Tax=Clostridium sp. CAG:81 RepID=R5GFN2_9CLOT
Protein translocase subunit secF/protein translocase subunit secD {ECO:0000313|EMBL:CCY11351.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
protein translocase subunit secF/protein translocase subunit secD
L3_114_000M1_scaffold_1619_29
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25271..26416
DNA (1146bp) protein (382aa)
tRNA-guanine transglycosylase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
Queuine tRNA-ribosyltransferase n=2 Tax=Clostridiales RepID=D7GSK3_9FIRM
L3_114_000M1_scaffold_1619_30
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26437..26715
DNA (279bp) protein (93aa)
Protein translocase subunit yajC n=2 Tax=Clostridiales RepID=D7GSK4_9FIRM
protein translocase subunit yajC
Protein translocase subunit yajC {ECO:0000313|EMBL:CCY11353.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
Displaying items 1-30 of 31 in total

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