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L3_114_000M1_scaffold_1886

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000M1_scaffold_1886_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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2..1384
DNA (1383bp) protein (461aa)
Probable permease protein of ABC transporter system n=1 Tax=Bifidobacterium longum (strain NCC 2705) RepID=Q8G7R8_BIFLO
multidrug ABC transporter ATP-binding protein
ABC transporter transmembrane region {ECO:0000313|EMBL:EIJ32520.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
L3_114_000M1_scaffold_1886_2
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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1395..3086
DNA (1692bp) protein (564aa)
ABC-type multidrug transport system ATPase and permease component n=13 Tax=Bifidobacterium RepID=B3DPC6_BIFLD
ABC transporter permease
Probable permease protein of ABC transporter system {ECO:0000313|EMBL:CCY96135.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L3_114_000M1_scaffold_1886_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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3333..5798
DNA (2466bp) protein (822aa)
Alpha-L-arabinofuranosidase domain protein n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5ECW8_BIFLI
Alpha-L-arabinofuranosidase domain protein {ECO:0000313|EMBL:EEQ55862.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
Alpha-L-arabinofuranosidase
L3_114_000M1_scaffold_1886_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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5737..5994
DNA (258bp) protein (86aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=I3BM98_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:EIJ32491.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
hypothetical protein
L3_114_000M1_scaffold_1886_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(6149..7894)
DNA (1746bp) protein (582aa)
Possible endo-1,5-alpha-L-arabinosidase n=3 Tax=Bifidobacterium longum RepID=Q8G7R5_BIFLO
Possible endo-1,5-alpha-L-arabinosidase {ECO:0000313|EMBL:AAN24036.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
endo-1,5-alpha-L-arabinosidase
L3_114_000M1_scaffold_1886_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8051..9280)
DNA (1230bp) protein (410aa)
Possible endo-1,5-alpha-L-arabinosidase n=2 Tax=Bifidobacterium longum RepID=Q8G7R4_BIFLO
endo-1,5-alpha-L-arabinosidase
Uncharacterized protein {ECO:0000313|EMBL:EEI80495.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L3_114_000M1_scaffold_1886_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(9410..9646)
DNA (237bp) protein (79aa)
Possible endo-1,5-alpha-L-arabinosidase n=2 Tax=Bifidobacterium longum RepID=Q8G7R4_BIFLO
endo-1,5-alpha-L-arabinosidase
Uncharacterized protein {ECO:0000313|EMBL:EEI80495.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L3_114_000M1_scaffold_1886_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9762..11894
DNA (2133bp) protein (711aa)
Large protein with C-terminal homology to alpha-arabinofuranosidase II n=1 Tax=Bifidobacterium longum (strain NCC 2705) RepID=Q8G7R3_BIFLO
Large protein with C-terminal homology to alpha-arabinofuranosidase II {ECO:0000313|EMBL:BAP84427.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
large protein with C-terminal homology to alpha-arabinofuranosidase II
L3_114_000M1_scaffold_1886_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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12009..13067
DNA (1059bp) protein (353aa)
RbsR-type transcription regulator/Ribose operon repressor n=7 Tax=Bifidobacterium RepID=B3DPD1_BIFLD
RbsR family transcriptional regulator/Ribose operon repressor
Periplasmic binding protein and sugar binding domain of the LacI family protein {ECO:0000313|EMBL:EIJ23397.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L3_114_000M1_scaffold_1886_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(13180..14124)
DNA (945bp) protein (315aa)
Esterase/lipase n=1 Tax=Bifidobacterium longum subsp. longum F8 RepID=D6DCJ9_BIFLN
Esterase/lipase
Esterase/lipase {ECO:0000313|EMBL:CBK70220.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L3_114_000M1_scaffold_1886_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14388..15422
DNA (1035bp) protein (345aa)
Predicted beta-xylosidase n=4 Tax=Bifidobacterium longum RepID=D6DCJ8_BIFLN
beta-xylosidase
Predicted beta-xylosidase {ECO:0000313|EMBL:CBK70219.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
Displaying 11 items

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