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L3_114_000M1_scaffold_2303

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000M1_scaffold_2303_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(3..161)
DNA (159bp) protein (53aa)
Dihydrodipicolinate synthase n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3L0H5_BIFBR
Dihydrodipicolinate synthase
Dihydrodipicolinate synthase {ECO:0000313|EMBL:AHJ21460.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L3_114_000M1_scaffold_2303_2
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(158..979)
DNA (822bp) protein (274aa)
Amidohydrolase family protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BRF7_9BIFI
amidohydrolase
Amidohydrolase {ECO:0000313|EMBL:AIZ15345.1}; TaxID=1447716 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense PV20-2.;"
L3_114_000M1_scaffold_2303_3
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(990..1781)
DNA (792bp) protein (264aa)
Bifidobacterium kashiwanohense JCM 15439 = DSM 21854 DNA, complete genome {ECO:0000313|EMBL:BAQ29971.1}; KR domain-containing protein {ECO:0000313|EMBL:KFI63927.1}; EC=1.1.1.100 {ECO:0000313|EMBL:KFI63927.1};; TaxID=1150460 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense JCM 15439 = DSM 21854.;"
Oxidoreductase, short chain dehydrogenase/reductase family protein n=2 Tax=Bifidobacterium breve RepID=F6C8A7_BIFBA
short-chain dehydrogenase
L3_114_000M1_scaffold_2303_4
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1797..3074)
DNA (1278bp) protein (426aa)
Bifidobacterium kashiwanohense JCM 15439 = DSM 21854 DNA, complete genome {ECO:0000313|EMBL:BAQ29972.1}; Mandelate racemase/muconate lactonizing enzyme C-terminal domain-containing protein {ECO:0000313|EMBL:KFI63926.1}; EC=4.2.1.68 {ECO:0000313|EMBL:KFI63926.1};; TaxID=1150460 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense JCM 15439 = DSM 21854.;"
Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BRF9_9BIFI
fuconate dehydratase
L3_114_000M1_scaffold_2303_5
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(3166..4557)
DNA (1392bp) protein (464aa)
Extracellular solute-binding protein, family 1 n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZY07_BIFLJ
Bifidobacterium kashiwanohense JCM 15439 = DSM 21854 DNA, complete genome {ECO:0000313|EMBL:BAQ29973.1}; Family 1 extracellular solute-binding protein {ECO:0000313|EMBL:KFI63925.1}; TaxID=1150460 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense JCM 15439 = DSM 21854.;"
family 1 extracellular solute-binding protein
L3_114_000M1_scaffold_2303_6
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(4676..5653)
DNA (978bp) protein (326aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZY06_BIFLJ
Bifidobacterium kashiwanohense JCM 15439 = DSM 21854 DNA, complete genome {ECO:0000313|EMBL:BAQ29974.1}; Binding-protein-dependent transporter inner membrane component {ECO:0000313|EMBL:KFI63924.1}; TaxID=1150460 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense JCM 15439 = DSM 21854.;"
ABC transporter permease
L3_114_000M1_scaffold_2303_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(5653..6564)
DNA (912bp) protein (304aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZY05_BIFLJ
binding-protein-dependent transporter inner membrane component
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADG99801.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
L3_114_000M1_scaffold_2303_8
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6921..7964
DNA (1044bp) protein (348aa)
Sugar-binding domain protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BRG3_9BIFI
LacI family transcriptional regulator
LacI family transcriptional regulator {ECO:0000313|EMBL:AIZ15351.1}; TaxID=1447716 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense PV20-2.;"
L3_114_000M1_scaffold_2303_9
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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8112..8315
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6Q560_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC17057.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
hypothetical protein
L3_114_000M1_scaffold_2303_10
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(8464..10230)
DNA (1767bp) protein (589aa)
Putative alkyl hydroperoxide reductase F subunit n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XW18_9BIFI
Alkyl hydroperoxide reductase protein F
Alkyl hydroperoxide reductase protein F {ECO:0000313|EMBL:AJE06771.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_114_000M1_scaffold_2303_11
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10333..10896)
DNA (564bp) protein (188aa)
Alkyl hydroperoxide reductase {ECO:0000313|EMBL:KEF27902.1}; EC=1.11.1.15 {ECO:0000313|EMBL:KEF27902.1};; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
Peroxiredoxin n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BV21_9BIFI
Alkyl hydroperoxide reductase protein C
Displaying 11 items

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