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L3_114_000M1_scaffold_148

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000M1_scaffold_148_1

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2..340
DNA (339bp) protein (113aa)
Uncharacterized protein (Fragment) n=1 Tax=human gut metagenome RepID=K1VAK2_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC80966.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_114_000M1_scaffold_148_2

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350..775
DNA (426bp) protein (142aa)
Protein containing Resolvase n=1 Tax=human gut metagenome RepID=K1URR9_9ZZZZ
Protein containing Resolvase {ECO:0000313|EMBL:EKC80965.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_114_000M1_scaffold_148_3
unknown

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762..947
DNA (186bp) protein (62aa)

This feature has no annotations

L3_114_000M1_scaffold_148_4
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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1077..1523
DNA (447bp) protein (149aa)
Resolvase, N-terminal domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PKF1_9FIRM
Resolvase {ECO:0000313|EMBL:KJF39291.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
putative recombinase
L3_114_000M1_scaffold_148_5
Youngiibacter fragilis, Youngiibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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2219..2776
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Youngiibacter fragilis 232.1 RepID=V7I963_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ETA81814.1}; TaxID=994573 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Youngiibacter.;" source="Youngiibacter fragilis 232.1.;"
XRE family transcriptional regulator
L3_114_000M1_scaffold_148_6
Bacillus pumilus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2769..3191
DNA (423bp) protein (141aa)
Uncharacterized protein {ECO:0000313|EMBL:KIL23302.1}; TaxID=1408 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus pumilus (Bacillus mesentericus).;"
protein export chaperone SecB
L3_114_000M1_scaffold_148_7
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3371..4288)
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CXY9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG56037.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
hypothetical protein
L3_114_000M1_scaffold_148_8
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4343..5590)
DNA (1248bp) protein (416aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RNU0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL75198.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L3_114_000M1_scaffold_148_9
unknown

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5919..6242
DNA (324bp) protein (108aa)

This feature has no annotations

L3_114_000M1_scaffold_148_10
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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6677..7897
DNA (1221bp) protein (407aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RNT9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL75197.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
Plasmid recombination enzyme.
L3_114_000M1_scaffold_148_11
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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8015..8164
DNA (150bp) protein (50aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RZQ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL63697.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L3_114_000M1_scaffold_148_12
Coprococcus sp. ART55/1, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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8370..9308
DNA (939bp) protein (313aa)
ABC-type multidrug transport system, ATPase component n=1 Tax=Coprococcus sp. ART55/1 RepID=D5HDG4_9FIRM
ABC-type multidrug transport system, ATPase component
ABC-type multidrug transport system, ATPase component {ECO:0000313|EMBL:CBK82947.1}; TaxID=751585 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. ART55/1.;"
L3_114_000M1_scaffold_148_13
unknown

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9292..10956
DNA (1665bp) protein (555aa)

This feature has no annotations

L3_114_000M1_scaffold_148_14
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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11050..11424
DNA (375bp) protein (125aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RNS0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL75178.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
helix-turn-helix domain-containing protein
L3_114_000M1_scaffold_148_15
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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11438..12943
DNA (1506bp) protein (502aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RNR9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL75177.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
Site-specific recombinases, DNA invertase Pin homologs
L3_114_000M1_scaffold_148_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13113..13823
DNA (711bp) protein (237aa)
Response regulator of the LytR/AlgR family n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXY1_9FIRM
Response regulator of the LytR/AlgR family
Response regulator of the LytR/AlgR family {ECO:0000313|EMBL:CBK98880.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_114_000M1_scaffold_148_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13823..15103
DNA (1281bp) protein (427aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXY0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK98879.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_114_000M1_scaffold_148_18
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15480..18482
DNA (3003bp) protein (1001aa)
Glycoside hydrolase family 3 domain protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IR74_9CLOT
Glycoside hydrolase family 3 domain protein {ECO:0000313|EMBL:CCY44600.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
glycoside hydrolase family protein
L3_114_000M1_scaffold_148_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18574..20991
DNA (2418bp) protein (806aa)
Beta-glucosidase-related glycosidases (EC:3.2.1.21)
Glycosyl hydrolase family 3 N-terminal domain protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S9B6_9FIRM
Glycosyl hydrolase family 3 N-terminal domain protein {ECO:0000313|EMBL:EDP22199.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L3_114_000M1_scaffold_148_20
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21007..21561
DNA (555bp) protein (185aa)
GtrA-like protein n=2 Tax=Faecalibacterium prausnitzii RepID=D4K902_9FIRM
GtrA-like protein.
Uncharacterized protein {ECO:0000313|EMBL:EDP22200.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L3_114_000M1_scaffold_148_21
Anaerostipes caccae, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21643..22416)
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MDB7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDR97937.1}; TaxID=411490 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes caccae DSM 14662.;"
putative transporter
L3_114_000M1_scaffold_148_22
Anaerostipes caccae, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22421..22858)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MDB6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDR97936.1}; TaxID=411490 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes caccae DSM 14662.;"
MarR family transcriptional regulator
L3_114_000M1_scaffold_148_23
unknown

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23450..23722
DNA (273bp) protein (91aa)

This feature has no annotations

L3_114_000M1_scaffold_148_24
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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23724..24545
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLF9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB76817.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L3_114_000M1_scaffold_148_25
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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24568..25374
DNA (807bp) protein (269aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLF8_9FIRM
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:EFB76816.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L3_114_000M1_scaffold_148_26
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25708..26415
DNA (708bp) protein (236aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
uridylate kinase (EC:2.7.4.22)
Uridylate kinase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLF7_9FIRM
L3_114_000M1_scaffold_148_27
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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26486..27040
DNA (555bp) protein (185aa)
Ribosome-recycling factor n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLF6_9FIRM
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
ribosome recycling factor
L3_114_000M1_scaffold_148_28
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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27146..28006
DNA (861bp) protein (287aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
CDP-diglyceride synthetase (EC:2.7.7.41)
Phosphatidate cytidylyltransferase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLF5_9FIRM
L3_114_000M1_scaffold_148_29
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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28019..29170
DNA (1152bp) protein (384aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLF4_9FIRM
L3_114_000M1_scaffold_148_30
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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29305..30411
DNA (1107bp) protein (369aa)
RIP metalloprotease RseP {ECO:0000313|EMBL:EFB76811.1}; EC=3.4.24.- {ECO:0000313|EMBL:EFB76811.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
RIP metalloprotease RseP n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLF3_9FIRM
RIP metalloprotease RseP
Displaying items 1-30 of 48 in total

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