ggKbase home page

L3_114_000M1_scaffold_4133

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000M1_scaffold_4133_1

Not on your lists

2..880
DNA (879bp) protein (293aa)
Integrase family protein (Fragment) n=1 Tax=human gut metagenome RepID=K1S1L7_9ZZZZ
Integrase family protein {ECO:0000313|EMBL:EKC47580.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
integrase family protein
L3_114_000M1_scaffold_4133_2
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1020..2129)
DNA (1110bp) protein (370aa)
Oxidoreductase, NAD-binding domain protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LF53_9FIRM
Oxidoreductase, NAD-binding domain protein {ECO:0000313|EMBL:EET60792.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
putative oxidoreductase
L3_114_000M1_scaffold_4133_3
Oribacterium sp. oral taxon 078, Oribacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2162..2992)
DNA (831bp) protein (277aa)
ABC transporter, permease protein n=1 Tax=Oribacterium sp. oral taxon 078 str. F0262 RepID=D4CND3_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:EFE91458.1}; TaxID=608534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Oribacterium.;" source="Oribacterium sp. oral taxon 078 str. F0262.;"
hypothetical protein
L3_114_000M1_scaffold_4133_4
Oribacterium sp. oral taxon 078, Oribacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2989..3915)
DNA (927bp) protein (309aa)
ABC transporter, permease protein n=1 Tax=Oribacterium sp. oral taxon 078 str. F0262 RepID=D4CND2_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:EFE91457.1}; TaxID=608534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Oribacterium.;" source="Oribacterium sp. oral taxon 078 str. F0262.;"
ABC transporter permease
L3_114_000M1_scaffold_4133_5
Oribacterium sp. oral taxon 078, Oribacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3990..5372)
DNA (1383bp) protein (461aa)
ABC transporter, solute-binding protein n=1 Tax=Oribacterium sp. oral taxon 078 str. F0262 RepID=D4CND1_9FIRM
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EFE91456.1}; TaxID=608534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Oribacterium.;" source="Oribacterium sp. oral taxon 078 str. F0262.;"
extracellular solute-binding protein
L3_114_000M1_scaffold_4133_6
Oribacterium sp. oral taxon 078, Oribacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5622..6512)
DNA (891bp) protein (297aa)
Transcriptional regulator, AraC family n=1 Tax=Oribacterium sp. oral taxon 078 str. F0262 RepID=D4CNC9_9FIRM
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EFE91454.1}; TaxID=608534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Oribacterium.;" source="Oribacterium sp. oral taxon 078 str. F0262.;"
chemotaxis protein CheY
L3_114_000M1_scaffold_4133_7
Oribacterium sp. oral taxon 078, Oribacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6734..6940
DNA (207bp) protein (69aa)
Dihydrodipicolinate synthase/N-acetylneuraminate lyase (EC:4.1.3.3)
Putative N-acetylneuraminate lyase n=1 Tax=Oribacterium sp. oral taxon 078 str. F0262 RepID=D4CNC7_9FIRM
Putative N-acetylneuraminate lyase {ECO:0000313|EMBL:EFE91452.1}; TaxID=608534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Oribacterium.;" source="Oribacterium sp. oral taxon 078 str. F0262.;"
L3_114_000M1_scaffold_4133_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6937..7623
DNA (687bp) protein (229aa)
Dihydrodipicolinate synthase/N-acetylneuraminate lyase (EC:4.1.3.3)
Dihydrodipicolinate synthase/N-acetylneuraminate lyase {ECO:0000313|EMBL:CBL01883.1}; EC=4.1.3.3 {ECO:0000313|EMBL:CBL01883.1};; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
Dihydrodipicolinate synthase/N-acetylneuraminate lyase n=2 Tax=Faecalibacterium prausnitzii RepID=D4KAM0_9FIRM
Displaying 8 items

View Taxonomy