name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
L3_114_000M1_scaffold_1353_1
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
312..1547
----------------- DNA (1236bp) protein (412aa) |
aminopeptidase (EC:3.4.11.-)
Thermophilic metalloprotease (M29) n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLP1_9FIRM
Thermophilic metalloprotease (M29) {ECO:0000313|EMBL:EFB76339.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
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L3_114_000M1_scaffold_1353_2
BJP_IG2157_Clostridiales_52_13, Dethiosulfatibacter, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
1535..2689
----------------- DNA (1155bp) protein (385aa) |
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1024 RepID=R5AQW5_9CLOT
Tax=BJP_IG2157_Clostridiales_52_13
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L3_114_000M1_scaffold_1353_3
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
3080..3577
----------------- DNA (498bp) protein (166aa) |
Ribosome maturation factor RimP n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLN8_9FIRM
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
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L3_114_000M1_scaffold_1353_4
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
3775..4848
----------------- DNA (1074bp) protein (358aa) |
Transcription termination factor NusA n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLN7_9FIRM
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
transcription termination factor NusA
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L3_114_000M1_scaffold_1353_5
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
5068..5376
----------------- DNA (309bp) protein (103aa) |
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLN6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB76334.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Predicted nucleic-acid-binding protein implicated in transcription termination
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L3_114_000M1_scaffold_1353_6
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
5369..5671
----------------- DNA (303bp) protein (101aa) |
Ribosomal protein L7Ae n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLN5_9FIRM
Ribosomal protein L7Ae {ECO:0000313|EMBL:EFB76333.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
|
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L3_114_000M1_scaffold_1353_7
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
5690..8143
----------------- DNA (2454bp) protein (818aa) |
Translation initiation factor IF-2 n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLN4_9FIRM
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
bacterial translation initiation factor 2 (bIF-2)
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L3_114_000M1_scaffold_1353_8
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
8185..8526
----------------- DNA (342bp) protein (114aa) |
Ribosome-binding factor A n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLN3_9FIRM
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
ribosome-binding factor A
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L3_114_000M1_scaffold_1353_9
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
8554..9537
----------------- DNA (984bp) protein (328aa) |
DHHA1 domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLN2_9FIRM
DHHA1 domain protein {ECO:0000313|EMBL:EFB76330.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Exopolyphosphatase-related proteins
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L3_114_000M1_scaffold_1353_10
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
9721..10614
----------------- DNA (894bp) protein (298aa) |
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
tRNA pseudouridine 55 synthase (EC:5.4.99.12)
tRNA pseudouridine synthase B n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLN1_9FIRM
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L3_114_000M1_scaffold_1353_11
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
10622..11557
----------------- DNA (936bp) protein (312aa) |
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
riboflavin kinase/FMN adenylyltransferase (EC:2.7.1.26 2.7.7.2)
Riboflavin biosynthesis protein RibF n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLN0_9FIRM
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L3_114_000M1_scaffold_1353_12
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
11714..11986
----------------- DNA (273bp) protein (91aa) |
30S ribosomal protein S15 n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLM9_9FIRM
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
SSU ribosomal protein S15P
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L3_114_000M1_scaffold_1353_13
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
12229..14388
----------------- DNA (2160bp) protein (720aa) |
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
polyribonucleotide nucleotidyltransferase (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLM8_9FIRM
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L3_114_000M1_scaffold_1353_14
Ruminococcus sp. CAG:488, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(14665..14844)
----------------- DNA (180bp) protein (60aa) |
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:488 RepID=R5Y726_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA20624.1}; TaxID=1262959 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:488.;"
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L3_114_000M1_scaffold_1353_15
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(15011..16219)
----------------- DNA (1209bp) protein (403aa) |
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
acetate kinase (EC:2.7.2.1)
Acetate kinase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLM7_9FIRM
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