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L3_114_000M1_scaffold_1473

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000M1_scaffold_1473_1
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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318..1820
DNA (1503bp) protein (501aa)
Glycerol kinase {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376}; EC=2.7.1.30 {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376};; ATP:glycerol 3-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00186}; Glycerokinase {ECO:0000256|HAMAP-Rule:MF_00186}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
glycerol kinase (EC:2.7.1.30)
Glycerol kinase n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6PZW5_9FIRM
L3_114_000M1_scaffold_1473_2
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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2108..3550
DNA (1443bp) protein (481aa)
FAD dependent oxidoreductase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PPT4_9FIRM
FAD dependent oxidoreductase {ECO:0000313|EMBL:EFB75280.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Predicted dehydrogenase
L3_114_000M1_scaffold_1473_3
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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3566..4819
DNA (1254bp) protein (418aa)
Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PPT5_9FIRM
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EFB75281.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Thioredoxin reductase
L3_114_000M1_scaffold_1473_4
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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4822..5187
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PPT6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB75282.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Uncharacterized protein with conserved CXXC pairs
L3_114_000M1_scaffold_1473_5
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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5443..6918
DNA (1476bp) protein (492aa)
Putative PTS system, N-acetylglucosamine-specific IIBC component n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PNG2_9FIRM
Putative PTS system, N-acetylglucosamine-specific IIBC component {ECO:0000313|EMBL:EFB76096.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
PTS system N-acetylglucosamine-specific IIB component, Glc family (TC 4.A.1.1.2)/PTS system N-acetylglucosamine-specific IIC component, Glc family (TC 4.A.1.1.2)
L3_114_000M1_scaffold_1473_6
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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7141..7869
DNA (729bp) protein (243aa)
Glucosamine-6-phosphate deaminase {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029492}; EC=3.5.99.6 {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029496};; GlcN6P deaminase {ECO:0000256|HAMAP-Rule:MF_01241}; Glucosamine-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01241}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
glucosamine-6-phosphate isomerase (EC:3.5.99.6)
Glucosamine-6-phosphate deaminase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PNG3_9FIRM
L3_114_000M1_scaffold_1473_7
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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7889..9016
DNA (1128bp) protein (376aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
N-acetylglucosamine 6-phosphate deacetylase (EC:3.5.1.25)
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PNG4_9FIRM
L3_114_000M1_scaffold_1473_8
unknown

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comp(9169..9651)
DNA (483bp) protein (161aa)

This feature has no annotations

L3_114_000M1_scaffold_1473_9
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9868..11214)
DNA (1347bp) protein (449aa)
Amino acid carrier protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PIG3_9FIRM
Amino acid carrier protein {ECO:0000313|EMBL:EFB77548.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
putative sodium/amino acid symporter
L3_114_000M1_scaffold_1473_10
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11440..13269)
DNA (1830bp) protein (610aa)
GTP-binding protein TypA n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQ20_9FIRM
GTP-binding protein TypA {ECO:0000313|EMBL:EFB75212.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
GTP-binding protein TypA/BipA
L3_114_000M1_scaffold_1473_11
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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13642..15300
DNA (1659bp) protein (553aa)
inorganic diphosphatase (EC:3.6.1.1)
DRTGG domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQ19_9FIRM
DRTGG domain protein {ECO:0000313|EMBL:EFB75211.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Displaying 11 items

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