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L3_114_000M1_scaffold_1641

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000M1_scaffold_1641_1
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..1546
DNA (1545bp) protein (515aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Elongation factor 4 n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PN65_9FIRM
GTP-binding protein LepA
L3_114_000M1_scaffold_1641_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1865..3013)
DNA (1149bp) protein (383aa)
Lactaldehyde reductase {ECO:0000313|EMBL:EEU96448.1}; EC=1.1.1.77 {ECO:0000313|EMBL:EEU96448.1};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
lactaldehyde reductase (EC:1.1.1.77)
Lactaldehyde reductase n=2 Tax=root RepID=C7H6C0_9FIRM
L3_114_000M1_scaffold_1641_3
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3352..3975)
DNA (624bp) protein (208aa)
H(+)-transporting ATP synthase, vacuolar type, subunit D (EC:3.6.3.14)
V-type ATP synthase subunit D n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I4R0_9FIRM
V-type ATP synthase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; V-ATPase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
L3_114_000M1_scaffold_1641_4
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4149..5537)
DNA (1389bp) protein (463aa)
Archaeal/vacuolar-type H+-ATPase subunit B (EC:3.6.3.14)
V-type ATP synthase beta chain n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HWS0_9FIRM
V-type ATP synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00310}; V-ATPase subunit B {ECO:0000256|HAMAP-Rule:MF_00310}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
L3_114_000M1_scaffold_1641_5
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5553..7307)
DNA (1755bp) protein (585aa)
V-type ATP synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00309}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_00309};; V-ATPase subunit A {ECO:0000256|HAMAP-Rule:MF_00309}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
atpA; V-type ATP synthase alpha chain (EC:3.6.3.14)
V-type ATP synthase alpha chain n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I7T3_9FIRM
L3_114_000M1_scaffold_1641_6
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7319..7909)
DNA (591bp) protein (197aa)
Putative ATP synthase subunit E n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6IU25_9FIRM
Putative ATP synthase subunit E {ECO:0000313|EMBL:CDB41477.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
Archaeal/vacuolar-type H+-ATPase subunit E
L3_114_000M1_scaffold_1641_7
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7921..8226)
DNA (306bp) protein (102aa)
ATP synthase, subunit F n=3 Tax=Clostridiales RepID=G9YP81_9FIRM
Vacuolar H+transporting two-sector ATPase F subunit
Vacuolar H+transporting two-sector ATPase F subunit {ECO:0000313|EMBL:CDZ24453.1}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
L3_114_000M1_scaffold_1641_8
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8231..8608)
DNA (378bp) protein (126aa)
ATP synthase subunit C n=1 Tax=Eubacterium sp. CAG:180 RepID=R5N594_9FIRM
ATP synthase subunit C {ECO:0000313|EMBL:CCY92362.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
ntpK; cation exporting V-type ATPase, subunit K
L3_114_000M1_scaffold_1641_9
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8760..10676)
DNA (1917bp) protein (639aa)
Archaeal/vacuolar-type H+-ATPase subunit I (EC:3.6.3.14)
V-type ATPase 116kDa subunit domain protein n=3 Tax=root RepID=R5MLK0_9FIRM
V-type ATPase 116kDa subunit domain protein {ECO:0000313|EMBL:CCY92363.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
L3_114_000M1_scaffold_1641_10
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10888..11946)
DNA (1059bp) protein (353aa)
Putative ATP synthase subunit C n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HWS7_9FIRM
Putative ATP synthase subunit C {ECO:0000313|EMBL:CDB41480.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
H+transporting two-sector ATPase C (AC39) subunit
L3_114_000M1_scaffold_1641_11
unknown

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comp(11943..12275)
DNA (333bp) protein (111aa)

This feature has no annotations

L3_114_000M1_scaffold_1641_12
Bacteroides pectinophilus CAG:437, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(12505..12978)
DNA (474bp) protein (158aa)
Uncharacterized protein n=2 Tax=Bacteria RepID=R7AFW4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDD57245.1}; TaxID=1263051 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides pectinophilus CAG:437.;"
hypothetical protein
L3_114_000M1_scaffold_1641_13
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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13283..13987
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PN71_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB76006.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Predicted membrane protein
L3_114_000M1_scaffold_1641_14
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14275..16470)
DNA (2196bp) protein (732aa)
E1-E2 ATPase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PN72_9FIRM
E1-E2 ATPase {ECO:0000313|EMBL:EFB76007.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
cation-transporting ATPase, E1-E2 family
Displaying 14 items

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