ggKbase home page

L3_114_000M1_scaffold_1647

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000M1_scaffold_1647_1
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

574..1815
DNA (1242bp) protein (414aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PM26_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB76291.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
5-bromo-4-chloroindolyl phosphate hydrolysis protein.
L3_114_000M1_scaffold_1647_2
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2009..2806
DNA (798bp) protein (266aa)
ABC-2 type transporter n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PM25_9FIRM
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
ABC transporter
L3_114_000M1_scaffold_1647_3
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2817..3557
DNA (741bp) protein (247aa)
ABC transporter, ATP-binding protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PM24_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFB76289.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Teichoic acids export ATP-binding protein TagH
L3_114_000M1_scaffold_1647_4
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3801..5585
DNA (1785bp) protein (595aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PM23_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB76288.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L3_114_000M1_scaffold_1647_5
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5589..7349
DNA (1761bp) protein (587aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PM22_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB76287.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L3_114_000M1_scaffold_1647_6
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7573..8769
DNA (1197bp) protein (399aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PNT0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB76215.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L3_114_000M1_scaffold_1647_7
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9020..9469)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PNR0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB76195.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L3_114_000M1_scaffold_1647_8
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9469..10242)
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PNQ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB76194.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L3_114_000M1_scaffold_1647_9
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10235..10996)
DNA (762bp) protein (254aa)
Cytidylyltransferase {ECO:0000313|EMBL:EFB76193.1}; EC=2.7.7.- {ECO:0000313|EMBL:EFB76193.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Cytidylyltransferase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PNQ8_9FIRM
acylneuraminate cytidylyltransferase
L3_114_000M1_scaffold_1647_10
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10993..11994)
DNA (1002bp) protein (334aa)
Oxidoreductase, NAD-binding domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PNQ7_9FIRM
Oxidoreductase, NAD-binding domain protein {ECO:0000313|EMBL:EFB76192.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
dehydrogenase
L3_114_000M1_scaffold_1647_11
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12071..13048)
DNA (978bp) protein (326aa)
Oxidoreductase, NAD-binding domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PNQ5_9FIRM
Oxidoreductase, NAD-binding domain protein {ECO:0000313|EMBL:EFB76190.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
dehydrogenase
L3_114_000M1_scaffold_1647_12
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13045..14232)
DNA (1188bp) protein (396aa)
UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing {ECO:0000313|EMBL:EFB76189.1}; EC=3.1.4.- {ECO:0000313|EMBL:EFB76189.1};; EC=5.1.3.- {ECO:0000313|EMBL:EFB76189.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PNQ4_9FIRM
UDP-N-acetyl-D-glucosamine 2-epimerase
Displaying 12 items

View Taxonomy