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L3_114_000M1_scaffold_2632

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000M1_scaffold_2632_1
unknown

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3..176
DNA (174bp) protein (58aa)

This feature has no annotations

L3_114_000M1_scaffold_2632_2
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(296..1849)
DNA (1554bp) protein (518aa)
Ribonuclease Y {ECO:0000256|HAMAP-Rule:MF_00335}; Short=RNase Y {ECO:0000256|HAMAP-Rule:MF_00335};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00335};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Ribonuclease Y n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PPZ3_9FIRM
conserved hypothetical protein YmdA/YtgF
L3_114_000M1_scaffold_2632_3
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2199..2942)
DNA (744bp) protein (248aa)
ThiF family protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLY8_9FIRM
ThiF family protein {ECO:0000313|EMBL:EFB76253.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
dinucleotide-utilizing enzyme possibly involved in molybdopterin or thiamin biosynthesis
L3_114_000M1_scaffold_2632_4
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3048..3530)
DNA (483bp) protein (161aa)
HD domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLZ2_9FIRM
HD domain protein {ECO:0000313|EMBL:EFB76257.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L3_114_000M1_scaffold_2632_5
Lachnospiraceae bacterium COE1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3515..4066)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium COE1 RepID=R9KH37_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS45566.1}; TaxID=1235793 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium COE1.;"
shikimate kinase
L3_114_000M1_scaffold_2632_6
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4115..4516)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9MNJ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS72694.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
putative P-loop ATPase
L3_114_000M1_scaffold_2632_7
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4516..5136)
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9MPJ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS72693.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
hypothetical protein
L3_114_000M1_scaffold_2632_8
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5133..5498)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9MXZ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS72692.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
hypothetical protein
L3_114_000M1_scaffold_2632_9
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5563..6099)
DNA (537bp) protein (179aa)
Uncharacterized protein n=2 Tax=Dorea sp. 5-2 RepID=R9MPU1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS72691.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
hypothetical protein
L3_114_000M1_scaffold_2632_10
Coprococcus eutactus CAG:665, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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6568..8067
DNA (1500bp) protein (500aa)
Uncharacterized protein n=1 Tax=Coprococcus eutactus CAG:665 RepID=R5VPE0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ92638.1}; TaxID=1263071 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus eutactus CAG:665.;"
hypothetical protein
L3_114_000M1_scaffold_2632_11
unknown

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8081..8227
DNA (147bp) protein (49aa)

This feature has no annotations

L3_114_000M1_scaffold_2632_12
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9267..9596)
DNA (330bp) protein (110aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RSI1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL71576.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
Displaying 12 items

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