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L3_114_000M1_scaffold_2860

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000M1_scaffold_2860_1
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

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1..1488
DNA (1488bp) protein (496aa)
Glycoside hydrolase family 35 n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6YAL2_9FIRM
Glycoside hydrolase family 35 {ECO:0000313|EMBL:CDD30955.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
glycoside hydrolase family 35
L3_114_000M1_scaffold_2860_2
Paenibacillus sp. FSL R7-0331, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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1497..4055
DNA (2559bp) protein (853aa)
hypothetical protein n=1 Tax=Paenibacillus sp. HW567 RepID=UPI00036EE5FB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIQ52150.1}; TaxID=1536773 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL R7-0331.;"
L3_114_000M1_scaffold_2860_3
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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4149..4313
DNA (165bp) protein (55aa)
Uncharacterized protein n=3 Tax=Bacteria RepID=A5N4T8_CLOK5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KGF54374.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L3_114_000M1_scaffold_2860_4
unknown

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comp(4616..4774)
DNA (159bp) protein (53aa)

This feature has no annotations

L3_114_000M1_scaffold_2860_5
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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5215..5547
DNA (333bp) protein (111aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CI12_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO30216.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_114_000M1_scaffold_2860_6
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5928..7412
DNA (1485bp) protein (495aa)
Uncharacterized protein n=2 Tax=root RepID=R6QMP5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC37893.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
Rad3-related DNA helicases
L3_114_000M1_scaffold_2860_7
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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7589..9043
DNA (1455bp) protein (485aa)
TraG/TraD family protein n=2 Tax=Clostridium hathewayi RepID=D3AGW1_9CLOT
TraG/TraD family protein {ECO:0000313|EMBL:EFC98935.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
Type IV secretory pathway, VirD4 components
L3_114_000M1_scaffold_2860_8
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9027..9422
DNA (396bp) protein (132aa)
S1 RNA binding domain protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D278_9CLOT
S1 RNA binding domain protein {ECO:0000313|EMBL:EEG54561.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
hypothetical protein
Displaying 8 items

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