ggKbase home page

L3_114_000M1_scaffold_472_15

Organism: dasL3_114_000M1_concoct_0_fa

near complete RP 48 / 55 BSCG 48 / 51 MC: 1 ASCG 12 / 38
Location: comp(17425..18027)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S4 n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PNH3_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 96.5
  • Coverage: 200.0
  • Bit_score: 386
  • Evalue 1.60e-104
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.5
  • Coverage: 200.0
  • Bit_score: 386
  • Evalue 2.30e-104
rpsD; 30S ribosomal protein S4 similarity KEGG
DB: KEGG
  • Identity: 77.5
  • Coverage: 200.0
  • Bit_score: 318
  • Evalue 9.10e-85

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Subdoligranulum variabile → Subdoligranulum → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 603
ATGGCTAAGAATACCCAACCTATCGCTAAGCGCTGCCGTGCTCTCGGCATTTCTCCTGCTGTTATGGGTTATGGCAAGAAGACCACCAATCGTAACCCCGGCGGCCAGATGAGAAAGAAGAAGAGCGAGTACGCCACCCAGCTGAACGAGAAGCAGAAGGTCAAGTTCGTCTATGGTATCCTGGAGAACCAGTTCCATACCTACTACGAGAAGGCCTCCCGCATGCCCGGCCAGACTGGTGTCAACCTGCTGGTCCTCGTCGAGCGCCGTCTCGACAACGTCGTCTACCGTCTGGGCTTTGCCAAGACCCGCCGCGACGCCCGCCAGTTGGTTTCCCACAACCACTTCACTGTCAATGGCAAGCGTGTCAACATCCCCTCTTACCAGGTCAAGCCGGGCGATGTGATCGAAGTCATCGAGTCCAGCCGTTCCTCCGTCAAGTTCAGCAAGCTGCTGGGCGAGGAGGCTCCTGTCGTGCTGCTGCCCTCCTGGCTGGAGCGTGACAAGAACGCCCTGAAGGGCACTGTCACCAAGCTGCCCGTTCGTGAGGACATCGATGTGCCCATCGCAGAGCACCTCATCGTCGAGTTGTACTCCAAGTAA
PROTEIN sequence
Length: 201
MAKNTQPIAKRCRALGISPAVMGYGKKTTNRNPGGQMRKKKSEYATQLNEKQKVKFVYGILENQFHTYYEKASRMPGQTGVNLLVLVERRLDNVVYRLGFAKTRRDARQLVSHNHFTVNGKRVNIPSYQVKPGDVIEVIESSRSSVKFSKLLGEEAPVVLLPSWLERDKNALKGTVTKLPVREDIDVPIAEHLIVELYSK*