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L3_114_000M1_scaffold_130

Search features with annotation key words

Displaying items 1-30 of 74 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000M1_scaffold_130_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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371..1042
DNA (672bp) protein (224aa)
Predicted transcription factor, homolog of eukaryotic MBF1 n=7 Tax=Bacteria RepID=D4MW16_9FIRM
Predicted transcription factor, homolog of eukaryotic MBF1
Uncharacterized protein {ECO:0000313|EMBL:EPD76780.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L3_114_000M1_scaffold_130_2
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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1412..2026
DNA (615bp) protein (205aa)
Predicted transcriptional regulators n=8 Tax=Bacteria RepID=D4MW15_9FIRM
Predicted transcriptional regulators
Uncharacterized protein {ECO:0000313|EMBL:EHQ48142.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
L3_114_000M1_scaffold_130_3
Catenibacterium mitsuokai, Catenibacterium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(2689..3339)
DNA (651bp) protein (217aa)
HAD hydrolase, family IA, variant 3 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=E2NNS6_9FIRM
HAD hydrolase, family IA, variant 3 {ECO:0000313|EMBL:EEF95129.1}; TaxID=451640 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Catenibacterium.;" source="Catenibacterium mitsuokai DSM 15897.;"
Predicted phosphatase/phosphohexomutase
L3_114_000M1_scaffold_130_4
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(3342..4742)
DNA (1401bp) protein (467aa)
6-phospho-beta-galactosidase {ECO:0000256|RuleBase:RU004469}; EC=3.2.1.- {ECO:0000256|RuleBase:RU004468};; EC=3.2.1.85 {ECO:0000256|RuleBase:RU004469};; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
lacG; 6-phospho-beta-galactosidase (EC:3.2.1.85)
6-phospho-beta-galactosidase n=2 Tax=Erysipelotrichaceae RepID=B0N8Y0_9FIRM
L3_114_000M1_scaffold_130_5
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(4810..6456)
DNA (1647bp) protein (549aa)
lacE; PTS system lactose-specific EIICB component (EC:2.7.1.69)
PTS system, lactose-specific IIC component n=5 Tax=Erysipelotrichaceae RepID=B0N8X9_9FIRM
PTS system lactose-specific IIC component {ECO:0000313|EMBL:CCZ32008.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L3_114_000M1_scaffold_130_6
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(6471..6776)
DNA (306bp) protein (102aa)
PTS system, lactose-specific IIa component n=5 Tax=Erysipelotrichaceae RepID=B0N8X8_9FIRM
PTS system, lactose-specific IIa component {ECO:0000313|EMBL:EHQ45515.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
lacF; lactose-specific phosphotransferase enzyme IIA component
L3_114_000M1_scaffold_130_7
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(6779..9355)
DNA (2577bp) protein (859aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. D7 RepID=C3RJL5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM91100.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
PTS system transcriptional activator
L3_114_000M1_scaffold_130_8
unknown

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comp(10118..10396)
DNA (279bp) protein (93aa)

This feature has no annotations

L3_114_000M1_scaffold_130_9
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(10421..10906)
DNA (486bp) protein (162aa)
PRD domain protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C036_9FIRM
PRD domain protein {ECO:0000313|EMBL:EDS75526.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
Transcription antiterminator, PTS operonregulator
L3_114_000M1_scaffold_130_10
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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11019..11831
DNA (813bp) protein (271aa)
Transcriptional regulator AraC family n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q5B0_9FIRM
Transcriptional regulator AraC family {ECO:0000313|EMBL:CCZ23945.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
AraC family transcriptional regulator
L3_114_000M1_scaffold_130_11
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(11885..12547)
DNA (663bp) protein (221aa)
Uncharacterized protein n=3 Tax=Coprobacillus RepID=C3RNT6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM93102.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
magnesium transporter
L3_114_000M1_scaffold_130_12
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(12563..13315)
DNA (753bp) protein (251aa)
Protein-tyrosine phosphatase n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GBR9_9FIRM
Protein-tyrosine phosphatase {ECO:0000313|EMBL:EFW04481.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
hypothetical protein
L3_114_000M1_scaffold_130_13
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(13312..14139)
DNA (828bp) protein (276aa)
PHP domain protein {ECO:0000313|EMBL:EDS20066.1}; EC=3.1.3.- {ECO:0000313|EMBL:EDS20066.1};; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
PHP domain protein n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N0B6_9FIRM
PHP domain-containing protein
L3_114_000M1_scaffold_130_14
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(14151..16007)
DNA (1857bp) protein (619aa)
PTS system beta-glucoside-specific transporter subunit IIABC (EC:2.7.1.69)
PTS system protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GBR7_9FIRM
PTS system protein {ECO:0000313|EMBL:EFW04479.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
L3_114_000M1_scaffold_130_15
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(16096..16938)
DNA (843bp) protein (281aa)
Transcriptional antiterminator n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GBR6_9FIRM
Transcriptional antiterminator {ECO:0000313|EMBL:EFW04478.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
BglG family transcriptional antiterminator
L3_114_000M1_scaffold_130_16
Pelotomaculum thermopropionicum, Pelotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17298..18248)
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D215_PELTS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAF59712.1}; TaxID=370438 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Pelotomaculum.;" source="Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI).;"
L3_114_000M1_scaffold_130_17
Dehalobacter sp. CF, Dehalobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18488..18643)
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Dehalobacter sp. DCA RepID=K4KRZ6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFV04095.1}; TaxID=1131462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Dehalobacter.;" source="Dehalobacter sp. CF.;"
L3_114_000M1_scaffold_130_18
unknown

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18782..19885
DNA (1104bp) protein (368aa)

This feature has no annotations

L3_114_000M1_scaffold_130_19
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(20034..21035)
DNA (1002bp) protein (334aa)
UDP-glucose 4-epimerase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q687_9FIRM
UDP-glucose 4-epimerase {ECO:0000313|EMBL:CCZ24018.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
UDP-galactose-4-epimerase
L3_114_000M1_scaffold_130_20
Catenibacterium sp. CAG:290, Catenibacterium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(21035..22318)
DNA (1284bp) protein (428aa)
Galactokinase (EC:2.7.1.6)
Galactokinase n=2 Tax=Catenibacterium RepID=R7GLY3_9FIRM
Galactokinase {ECO:0000313|EMBL:CDE28404.1}; TaxID=1262767 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Catenibacterium; environmental samples.;" source="Catenibacterium sp. CAG:290.;"
L3_114_000M1_scaffold_130_21
Catenibacterium sp. CAG:290, Catenibacterium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(22318..23805)
DNA (1488bp) protein (496aa)
Galactose-1-phosphate uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571}; Short=Gal-1-P uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571};; EC=2.7.7.12 {ECO:0000256|HAMAP-Rule:MF_00571};; UDP-glucose--hexose-1-phosphate uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571}; TaxID=1262767 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Catenibacterium; environmental samples.;" source="Catenibacterium sp. CAG:290.;"
galT; galactose-1-phosphate uridylyltransferase (EC:2.7.7.12)
Galactose-1-phosphate uridylyltransferase n=1 Tax=Catenibacterium sp. CAG:290 RepID=R7GPN3_9FIRM
L3_114_000M1_scaffold_130_22
Catenibacterium mitsuokai, Catenibacterium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(23957..24298)
DNA (342bp) protein (114aa)
Transcriptional regulator, LacI family n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=E2NVJ4_9FIRM
Transcriptional regulator, LacI family {ECO:0000313|EMBL:EEF92763.1}; TaxID=451640 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Catenibacterium.;" source="Catenibacterium mitsuokai DSM 15897.;"
transcriptional regulator, LacI family
L3_114_000M1_scaffold_130_23
Catenibacterium mitsuokai, Catenibacterium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(24328..24948)
DNA (621bp) protein (207aa)
Transcriptional regulator, LacI family n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=E2NVJ4_9FIRM
Transcriptional regulator, LacI family {ECO:0000313|EMBL:EEF92763.1}; TaxID=451640 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Catenibacterium.;" source="Catenibacterium mitsuokai DSM 15897.;"
transcriptional regulator, LacI family
L3_114_000M1_scaffold_130_24
Staphylococcus simulans, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(25162..25332)
DNA (171bp) protein (57aa)
bgaC; beta-galactosidase (EC:3.2.1.23)
Uncharacterized protein n=1 Tax=Staphylococcus simulans ACS-120-V-Sch1 RepID=K8NDS4_STASI
Uncharacterized protein {ECO:0000313|EMBL:ERS94575.1}; TaxID=1405498 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus simulans UMC-CNS-990.;"
L3_114_000M1_scaffold_130_25
unknown

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comp(26136..26354)
DNA (219bp) protein (73aa)

This feature has no annotations

L3_114_000M1_scaffold_130_26
unknown

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comp(26430..26729)
DNA (300bp) protein (100aa)

This feature has no annotations

L3_114_000M1_scaffold_130_27
unknown

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comp(26779..26937)
DNA (159bp) protein (53aa)

This feature has no annotations

L3_114_000M1_scaffold_130_28
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(27643..27960)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 3_3_56FAA RepID=G9R4C9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM90364.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
hypothetical protein
L3_114_000M1_scaffold_130_29
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(27962..28240)
DNA (279bp) protein (93aa)
Prevent-host-death family protein n=1 Tax=Coprobacillus sp. 3_3_56FAA RepID=G9R4C8_9FIRM
Prevent-host-death family protein {ECO:0000313|EMBL:EHM90363.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
prevent-host-death family protein
L3_114_000M1_scaffold_130_30
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

28950..30629
DNA (1680bp) protein (560aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q3N3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ23078.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
Displaying items 1-30 of 74 in total

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