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L3_114_000M1_scaffold_947

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000M1_scaffold_947_1
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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2..421
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QQ51_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24331.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L3_114_000M1_scaffold_947_2
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(452..1600)
DNA (1149bp) protein (383aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q8K4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25030.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L3_114_000M1_scaffold_947_3
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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1725..3404
DNA (1680bp) protein (560aa)
Glycosyltransferase group 4 family n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QFF9_9FIRM
Glycosyltransferase group 4 family {ECO:0000313|EMBL:CCZ25029.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
tarO; putative glycosyl transferase
L3_114_000M1_scaffold_947_4
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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3493..3723
DNA (231bp) protein (77aa)
Preprotein translocase SecG subunit n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q936_9FIRM
Preprotein translocase SecG subunit {ECO:0000313|EMBL:CCZ25028.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L3_114_000M1_scaffold_947_5
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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3770..5950
DNA (2181bp) protein (727aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Ribonuclease R n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QVJ8_9FIRM
rnr; exoribonuclease R
L3_114_000M1_scaffold_947_6
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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5968..6414
DNA (447bp) protein (149aa)
SsrA-binding protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QS60_9FIRM
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
SsrA-binding protein
L3_114_000M1_scaffold_947_7
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

6963..7112
DNA (150bp) protein (50aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q8U2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24968.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L3_114_000M1_scaffold_947_8
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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7291..8106
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 3_3_56FAA RepID=G9R6P9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM88405.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
L3_114_000M1_scaffold_947_9
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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8126..8305
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q8A5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24965.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L3_114_000M1_scaffold_947_10
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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8438..9607
DNA (1170bp) protein (390aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QF67_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24964.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L3_114_000M1_scaffold_947_11
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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9627..10292
DNA (666bp) protein (222aa)
Putative DNA-binding response regulator LytTr family n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q8T7_9FIRM
Putative DNA-binding response regulator LytTr family {ECO:0000313|EMBL:CCZ24963.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Response regulator of the LytR/AlgR family
L3_114_000M1_scaffold_947_12
Catenibacterium mitsuokai, Catenibacterium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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10597..11904
DNA (1308bp) protein (436aa)
Uncharacterized protein n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=E2NVB0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF92843.1}; TaxID=451640 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Catenibacterium.;" source="Catenibacterium mitsuokai DSM 15897.;"
L3_114_000M1_scaffold_947_13
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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12172..12324
DNA (153bp) protein (51aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QF39_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24939.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L3_114_000M1_scaffold_947_14
Paenibacillus terrae, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(12346..12660)
DNA (315bp) protein (105aa)
Transcriptional regulator, AraC family n=2 Tax=Paenibacillus polymyxa RepID=E3EE82_PAEPS
AraC family transcriptional regulator
AraC family transcriptional regulator {ECO:0000313|EMBL:KJD42240.1}; TaxID=159743 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus terrae.;"
L3_114_000M1_scaffold_947_15
unknown

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comp(12700..12792)
DNA (93bp) protein (31aa)

This feature has no annotations

L3_114_000M1_scaffold_947_16
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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12923..13666
DNA (744bp) protein (248aa)
Transcriptional regulator MerR family n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QVA1_9FIRM
Transcriptional regulator MerR family {ECO:0000313|EMBL:CCZ24962.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
transcriptional regulator, MerR family protein
L3_114_000M1_scaffold_947_17
Sebaldella termitidis, Sebaldella, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

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comp(13827..14633)
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Sebaldella termitidis (strain ATCC 33386 / NCTC 11300) RepID=D1ALD1_SEBTE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ09274.1}; TaxID=526218 species="Bacteria; Fusobacteria; Fusobacteriales; Leptotrichiaceae; Sebaldella.;" source="Sebaldella termitidis (strain ATCC 33386 / NCTC 11300).;"
L3_114_000M1_scaffold_947_18
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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14839..15402
DNA (564bp) protein (188aa)
Transcriptional regulator TetR family n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q8S6_9FIRM
Transcriptional regulator TetR family {ECO:0000313|EMBL:CCZ24953.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
transcriptional regulator TetR family
L3_114_000M1_scaffold_947_19
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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15541..17586
DNA (2046bp) protein (682aa)
enr2; 2-enoate reductase Enr2 (EC:1.3.1.31)
2-enoate reductase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QV91_9FIRM
2-enoate reductase {ECO:0000313|EMBL:CCZ24952.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L3_114_000M1_scaffold_947_20
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17720..18154
DNA (435bp) protein (145aa)
Predicted transcriptional regulator n=1 Tax=Clostridium sp. CAG:81 RepID=R5G4G8_9CLOT
Predicted transcriptional regulator {ECO:0000313|EMBL:CCY10784.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
hypothetical protein
L3_114_000M1_scaffold_947_21
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

18117..18356
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QV63_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24922.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L3_114_000M1_scaffold_947_22
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(18424..19764)
DNA (1341bp) protein (447aa)
MATE efflux family protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QRS0_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:CCZ24921.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Na+ driven multidrug efflux pump
L3_114_000M1_scaffold_947_23
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

19849..20124
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q865_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24920.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L3_114_000M1_scaffold_947_24
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

20111..20455
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QF16_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24919.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
monooxygenase
Displaying 24 items

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