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L3_114_000M1_scaffold_1923

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000M1_scaffold_1923_1
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(234..539)
DNA (306bp) protein (102aa)
Branched-chain amino acid transport protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QBY8_9FIRM
Branched-chain amino acid transport protein {ECO:0000313|EMBL:CCZ23834.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
branched-chain amino acid transporter
L3_114_000M1_scaffold_1923_2
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(532..1227)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q5J6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ23833.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L3_114_000M1_scaffold_1923_3
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(1284..1931)
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QS45_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ23832.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
novobiocin family exporter
L3_114_000M1_scaffold_1923_4
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(2098..4299)
DNA (2202bp) protein (734aa)
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QNQ6_9FIRM
Integral membrane sensor signal transduction histidine kinase {ECO:0000313|EMBL:CCZ23831.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
two-component sensor histidine kinase
L3_114_000M1_scaffold_1923_5
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4308..5009)
DNA (702bp) protein (234aa)
Response regulator receiver domain protein n=1 Tax=Dorea sp. CAG:105 RepID=R5D4C5_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:CCX73654.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
DNA-binding response regulator
L3_114_000M1_scaffold_1923_6
Catenibacterium mitsuokai, Catenibacterium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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5338..6177
DNA (840bp) protein (280aa)
Transcriptional regulator, MerR family n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=E2NVH1_9FIRM
Transcriptional regulator, MerR family {ECO:0000313|EMBL:EEF92794.1}; TaxID=451640 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Catenibacterium.;" source="Catenibacterium mitsuokai DSM 15897.;"
Transcriptional regulator, MerR family
L3_114_000M1_scaffold_1923_7
Catenibacterium sp. CAG:290, Catenibacterium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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6238..7263
DNA (1026bp) protein (342aa)
Dihydrodipicolinate reductase domain protein n=1 Tax=Catenibacterium sp. CAG:290 RepID=R7GM88_9FIRM
Dihydrodipicolinate reductase domain protein {ECO:0000313|EMBL:CDE27082.1}; TaxID=1262767 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Catenibacterium; environmental samples.;" source="Catenibacterium sp. CAG:290.;"
dihydrodipicolinate reductase
L3_114_000M1_scaffold_1923_8
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(7278..9062)
DNA (1785bp) protein (595aa)
Alpha amylase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q8P6_9FIRM
Alpha amylase {ECO:0000313|EMBL:CCZ25085.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
alpha amylase
L3_114_000M1_scaffold_1923_9
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(9004..9783)
DNA (780bp) protein (260aa)
Transcriptional regulator n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QSA7_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:CCZ25086.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
AraC family transcriptional regulator
L3_114_000M1_scaffold_1923_10
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(9820..10395)
DNA (576bp) protein (192aa)
pyridoxal phosphate synthase yaaE subunit (EC:2.6.-.-)
Glutamine amidotransferase subunit PdxT n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QVQ4_9FIRM
Glutamine amidotransferase subunit PdxT {ECO:0000313|EMBL:CCZ25087.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L3_114_000M1_scaffold_1923_11
Clostridium sp. CAG:411, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10395..11270)
DNA (876bp) protein (292aa)
Pyridoxal 5'-phosphate synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824}; Short=PLP synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824};; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01824};; Pdx1 {ECO:0000256|HAMAP-Rule:MF_01824}; TaxID=1262802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:411.;"
pyridoxal phosphate synthase yaaD subunit (EC:4.-.-.-)
Pyridoxal biosynthesis lyase PdxS n=1 Tax=Clostridium sp. CAG:411 RepID=R7I0G1_9CLOT
L3_114_000M1_scaffold_1923_12
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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11384..12772
DNA (1389bp) protein (463aa)
Transcriptional regulator GntR family n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q8A8_9FIRM
Transcriptional regulator GntR family {ECO:0000313|EMBL:CCZ24808.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
transcriptional regulator, GntR family
Displaying 12 items

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