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L3_114_000M1_scaffold_403

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000M1_scaffold_403_1
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..1476
DNA (1476bp) protein (492aa)
ABC transporter n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CLN1_9FIRM
ABC transporter {ECO:0000313|EMBL:CDD78657.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ABC transporter ATP-binding protein/permease
L3_114_000M1_scaffold_403_2
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1473..3311
DNA (1839bp) protein (613aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEV4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76301.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
ABC-type multidrug transport system, ATPase and permease components
L3_114_000M1_scaffold_403_3
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3498..5663
DNA (2166bp) protein (722aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Superfamily I DNA and RNA helicases (EC:3.6.1.-)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEV3_9FIRM
L3_114_000M1_scaffold_403_4
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5984..7132
DNA (1149bp) protein (383aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEV2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76299.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_114_000M1_scaffold_403_5
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7304..8116
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CHJ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77440.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Methylase involved in ubiquinone/menaquinone biosynthesis
L3_114_000M1_scaffold_403_6
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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8234..9112
DNA (879bp) protein (293aa)
33 kDa chaperonin n=2 Tax=Ruminococcus RepID=C6JEU9_9FIRM
33 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00117, ECO:0000256|SAAS:SAAS00038673}; Heat shock protein 33 homolog {ECO:0000256|HAMAP-Rule:MF_00117}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Disulfide bond chaperones of the HSP33 family
L3_114_000M1_scaffold_403_7
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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9171..11087
DNA (1917bp) protein (639aa)
NAD+ synthetase (EC:6.3.5.1)
NAD+ synthetase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEU8_9FIRM
NAD+ synthetase {ECO:0000313|EMBL:EES76295.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_114_000M1_scaffold_403_8
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11149..11586)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CGT9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77424.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_114_000M1_scaffold_403_9
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11691..15065
DNA (3375bp) protein (1125aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CI54_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77422.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ATP-dependent nuclease subunit B
L3_114_000M1_scaffold_403_10
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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15067..18876
DNA (3810bp) protein (1270aa)
ATP-dependent helicase/nuclease subunit A {ECO:0000256|HAMAP-Rule:MF_01451, ECO:0000256|SAAS:SAAS00044589}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01451, ECO:0000256|SAAS:SAAS00274943};; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01451, ECO:0000256|SAAS:SAAS00145970};; ATP-dependent helicase/nuclease AddA {ECO:0000256|HAMAP-Rule:MF_01451}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
recombination helicase AddA, Firmicutes type (EC:3.1.11.5)
ATP-dependent helicase/nuclease subunit A n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CHH6_9FIRM
L3_114_000M1_scaffold_403_11
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18931..20334)
DNA (1404bp) protein (468aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEU4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76291.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
NOL1/NOP2/sun family putative RNA methylase
L3_114_000M1_scaffold_403_12
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21098..21418
DNA (321bp) protein (107aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JEU3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76290.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
transcriptional regulator, PadR family
L3_114_000M1_scaffold_403_13
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21415..22122
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CI49_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77417.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Protein of unknown function (DUF1700).
L3_114_000M1_scaffold_403_14
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22119..23087
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CHA0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77416.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Protein of unknown function (DUF2807).
L3_114_000M1_scaffold_403_15
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23220..23405
DNA (186bp) protein (62aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JEU0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76287.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Putative stress-responsive transcriptional regulator
L3_114_000M1_scaffold_403_16
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23553..23750
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CGT2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77414.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Small, acid-soluble spore proteins, alpha/beta type.
L3_114_000M1_scaffold_403_17
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24024..24992
DNA (969bp) protein (323aa)
trans-1,2-dihydrobenzene-1,2-diol dehydrogenase (EC:1.3.1.20)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JET8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76285.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_114_000M1_scaffold_403_18
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25187..27868
DNA (2682bp) protein (894aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI000300D02B
Uncharacterized protein {ECO:0000313|EMBL:CDD78713.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_114_000M1_scaffold_403_19
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28155..28913
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:257 RepID=R5X1L0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA06224.1}; TaxID=1262756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:257.;"
L3_114_000M1_scaffold_403_20
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29056..29943)
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFU3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75922.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
putative peptidoglycan-binding domain-containing protein
L3_114_000M1_scaffold_403_21
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30131..30466)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFU4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75923.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
XRE family transcriptional regulator
L3_114_000M1_scaffold_403_22
Blautia sp. CAG:237, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30585..31139
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:237 RepID=R6LXX4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB78827.1}; TaxID=1262755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:237.;"
L3_114_000M1_scaffold_403_23
Blautia sp. CAG:237, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31145..31852
DNA (708bp) protein (236aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002DF176F
Uncharacterized protein {ECO:0000313|EMBL:CDB78826.1}; TaxID=1262755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:237.;"
Response regulator of the LytR/AlgR family
L3_114_000M1_scaffold_403_24
Blautia sp. CAG:237, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31856..33337
DNA (1482bp) protein (494aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:237 RepID=R6KZA4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB78825.1}; TaxID=1262755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:237.;"
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
L3_114_000M1_scaffold_403_25
unknown

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33354..33482
DNA (129bp) protein (43aa)

This feature has no annotations

L3_114_000M1_scaffold_403_26
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33473..35632
DNA (2160bp) protein (720aa)
Type 2 lantibiotic biosynthesis protein LanM n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFU8_9FIRM
Type 2 lantibiotic biosynthesis protein LanM {ECO:0000313|EMBL:EES75927.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
lanM; type 2 lantibiotic biosynthesis protein LanM
Displaying 26 items

View Taxonomy