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L3_114_000M1_scaffold_476

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000M1_scaffold_476_1
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(438..1298)
DNA (861bp) protein (287aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JHD0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC17773.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
Macrocin-O-methyltransferase (TylF).
L3_114_000M1_scaffold_476_2
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1295..2320)
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CHY9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76933.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family
L3_114_000M1_scaffold_476_3
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2390..3463)
DNA (1074bp) protein (358aa)
Metal dependent phosphohydrolase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CFE2_9FIRM
Metal dependent phosphohydrolase {ECO:0000313|EMBL:CDD76934.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
uncharacterized domain HDIG
L3_114_000M1_scaffold_476_4
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3456..4385)
DNA (930bp) protein (310aa)
ModE molybdate transport repressor domain-containing protein n=3 Tax=Ruminococcus RepID=C6JHD3_9FIRM
Regulatory protein {ECO:0000313|EMBL:CDC17776.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
Uncharacterized MobA-related protein
L3_114_000M1_scaffold_476_5
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4596..4856
DNA (261bp) protein (87aa)
Uncharacterized protein n=3 Tax=Ruminococcus RepID=C6JHD4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76936.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_114_000M1_scaffold_476_6
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4893..7655
DNA (2763bp) protein (921aa)
aldehyde dehydrogenase, molybdenum-binding subunit apoprotein (EC:1.2.99.7)
Aldehyde dehydrogenase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CGR8_9FIRM
Aldehyde dehydrogenase {ECO:0000313|EMBL:CDD76937.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L3_114_000M1_scaffold_476_7
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7739..10033
DNA (2295bp) protein (765aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JHD6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75541.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Fe-S oxidoreductase
L3_114_000M1_scaffold_476_8
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10033..10254
DNA (222bp) protein (74aa)
Uncharacterized protein n=8 Tax=Clostridiales RepID=A5ZR25_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCY98866.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
L3_114_000M1_scaffold_476_9
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10255..10788
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CG50_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76940.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Methylase involved in ubiquinone/menaquinone biosynthesis
L3_114_000M1_scaffold_476_10
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10792..11223
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CFV5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76941.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
C_GCAxxG_C_C family probable redox protein
L3_114_000M1_scaffold_476_11
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11220..12545
DNA (1326bp) protein (442aa)
Radical SAM domain-containing protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CGS2_9FIRM
Radical SAM domain-containing protein {ECO:0000313|EMBL:CDD76942.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Predicted Fe-S oxidoreductases
L3_114_000M1_scaffold_476_12
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12542..13738
DNA (1197bp) protein (399aa)
Coenzyme F390 synthetase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CHZ7_9FIRM
Coenzyme F390 synthetase {ECO:0000313|EMBL:CDD76943.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Coenzyme F390 synthetase
L3_114_000M1_scaffold_476_13
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13814..14551)
DNA (738bp) protein (246aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JHE2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75547.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_114_000M1_scaffold_476_14
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14557..15588)
DNA (1032bp) protein (344aa)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR001361}; DAHP synthase {ECO:0000256|PIRNR:PIRNR001361}; Phospho-2-keto-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase n=2 Tax=Ruminococcus RepID=C6JHE3_9FIRM
L3_114_000M1_scaffold_476_15
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15613..16116
DNA (504bp) protein (168aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JHE4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC17787.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
hypothetical protein
L3_114_000M1_scaffold_476_16
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16193..16711
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P079_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC17788.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
Acetyltransferase (GNAT) family.
L3_114_000M1_scaffold_476_17
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16743..17441
DNA (699bp) protein (233aa)
metallophosphoesterase n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002F2E375
Metallophosphoesterase {ECO:0000313|EMBL:CDD76948.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
metallophosphoesterase
L3_114_000M1_scaffold_476_18
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17538..18623
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P9K6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC17404.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
hypothetical protein
L3_114_000M1_scaffold_476_19
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18642..20012
DNA (1371bp) protein (457aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JHE8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75553.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Predicted metallopeptidase (DUF2201).
L3_114_000M1_scaffold_476_20
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20068..21621
DNA (1554bp) protein (518aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CFW4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76951.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ATPase family associated with various cellular activities (AAA).
L3_114_000M1_scaffold_476_21
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21778..22215
DNA (438bp) protein (146aa)
GatB/YqeY domain-containing protein n=2 Tax=environmental samples RepID=R6NTR3_9FIRM
GatB/YqeY domain-containing protein {ECO:0000313|EMBL:CDD76969.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_114_000M1_scaffold_476_22
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22406..23254
DNA (849bp) protein (283aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JHG7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76970.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
AraC-type DNA-binding domain-containing proteins
L3_114_000M1_scaffold_476_23
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23349..23966
DNA (618bp) protein (206aa)
Uncharacterized protein n=3 Tax=Ruminococcus RepID=C6JHG8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76971.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_114_000M1_scaffold_476_24
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24060..25541
DNA (1482bp) protein (494aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JHG9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75496.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L-fucose isomerase and related proteins
L3_114_000M1_scaffold_476_25
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25686..27143
DNA (1458bp) protein (486aa)
xylulokinase (EC:2.7.1.17)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P1Q9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC14609.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L3_114_000M1_scaffold_476_26
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27255..28190)
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JHH1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75498.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
LysR family transcriptional regulator
L3_114_000M1_scaffold_476_27
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28306..29730
DNA (1425bp) protein (475aa)
Aspartate ammonia-lyase n=3 Tax=Ruminococcus RepID=C6JHH2_9FIRM
Fumarate lyase {ECO:0000313|EMBL:CDC14607.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
aspartate ammonia-lyase
L3_114_000M1_scaffold_476_28
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29839..31524)
DNA (1686bp) protein (562aa)
Formate--tetrahydrofolate ligase {ECO:0000256|HAMAP-Rule:MF_01543}; EC=6.3.4.3 {ECO:0000256|HAMAP-Rule:MF_01543};; Formyltetrahydrofolate synthetase {ECO:0000256|HAMAP-Rule:MF_01543}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Formate-tetrahydrofolate ligase (EC:6.3.4.3)
Formate--tetrahydrofolate ligase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JHH3_9FIRM
Displaying 28 items

View Taxonomy