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L3_114_000M1_scaffold_583

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000M1_scaffold_583_1
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..145
DNA (144bp) protein (48aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JBW7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77261.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_114_000M1_scaffold_583_2
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(283..675)
DNA (393bp) protein (131aa)
C_GCAxxG_C_C family protein n=2 Tax=Ruminococcus RepID=C6JBW6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78348.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
C_GCAxxG_C_C family probable redox protein
L3_114_000M1_scaffold_583_3
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

991..1854
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JBW5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77259.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
phosphate ABC transporter substrate-binding protein, PhoT family (TC 3.A.1.7.1)
L3_114_000M1_scaffold_583_4
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2001..2858
DNA (858bp) protein (286aa)
Phosphate ABC transporter, permease PstC n=2 Tax=Ruminococcus RepID=C6JBW4_9FIRM
Phosphate ABC transporter {ECO:0000313|EMBL:CDD78350.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
phosphate ABC transporter membrane protein 1, PhoT family (TC 3.A.1.7.1)
L3_114_000M1_scaffold_583_5
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2848..3753
DNA (906bp) protein (302aa)
Phosphate ABC transporter, permease PstA n=2 Tax=Ruminococcus RepID=C6JBW3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78351.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
phosphate ABC transporter membrane protein 2, PhoT family (TC 3.A.1.7.1)
L3_114_000M1_scaffold_583_6
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3759..4517
DNA (759bp) protein (253aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
phosphate ABC transporter ATP-binding protein, PhoT family (TC 3.A.1.7.1) (EC:3.6.3.27)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CKV0_9FIRM
L3_114_000M1_scaffold_583_7
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4520..5191
DNA (672bp) protein (224aa)
Phosphate-specific transport system accessory protein PhoU n=2 Tax=Ruminococcus RepID=C6JBW1_9FIRM
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
phosphate uptake regulator, PhoU
L3_114_000M1_scaffold_583_8
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5474..7141
DNA (1668bp) protein (556aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Signal transduction histidine kinase (EC:2.7.13.3)
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CJG9_9FIRM
L3_114_000M1_scaffold_583_9
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7620..10385
DNA (2766bp) protein (922aa)
beta-glucosidase (EC:3.2.1.21)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JBV4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77248.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_114_000M1_scaffold_583_10
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10583..11140
DNA (558bp) protein (186aa)
Transcriptional regulator n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CMZ7_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:CDD78738.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Transcriptional regulator
L3_114_000M1_scaffold_583_11
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11396..11977
DNA (582bp) protein (194aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JBV2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78740.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_114_000M1_scaffold_583_12
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12051..13400
DNA (1350bp) protein (450aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JBV1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77245.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Predicted Fe-S oxidoreductases
L3_114_000M1_scaffold_583_13
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13663..15309
DNA (1647bp) protein (549aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CKM5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78744.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
L3_114_000M1_scaffold_583_14
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15313..16764
DNA (1452bp) protein (484aa)
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./Histidine kinase./HAMP domain. (EC:2.7.13.3)
Periplasmic sensor signal transduction histidine kinase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CL79_9FIRM
Periplasmic sensor signal transduction histidine kinase {ECO:0000313|EMBL:CDD78746.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L3_114_000M1_scaffold_583_15
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17168..18226
DNA (1059bp) protein (353aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JBU8_9FIRM
Periplasmic binding protein/LacI transcriptional regulator {ECO:0000313|EMBL:CDD78748.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-)
L3_114_000M1_scaffold_583_16
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18416..19936
DNA (1521bp) protein (507aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JBU7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77241.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-)
L3_114_000M1_scaffold_583_17
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19936..20991
DNA (1056bp) protein (352aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JBU6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77240.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
monosaccharide ABC transporter membrane protein, CUT2 family (TC 3.A.1.2.-)
L3_114_000M1_scaffold_583_18
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20991..22013
DNA (1023bp) protein (341aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JBU5_9FIRM
Inner-membrane translocator {ECO:0000313|EMBL:CDD78754.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
monosaccharide ABC transporter membrane protein, CUT2 family (TC 3.A.1.2.-)
L3_114_000M1_scaffold_583_19
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22348..23205
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JBU4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77238.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Predicted SAM-dependent methyltransferases
L3_114_000M1_scaffold_583_20
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23342..24205
DNA (864bp) protein (288aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JBU3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77226.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_114_000M1_scaffold_583_21
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24322..24507
DNA (186bp) protein (62aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=R7CGY7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77225.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_114_000M1_scaffold_583_22
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24732..26537
DNA (1806bp) protein (602aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HDX2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF00318.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
histidine kinase
L3_114_000M1_scaffold_583_23
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26518..27981
DNA (1464bp) protein (488aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HDX1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF00317.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
Displaying 23 items

View Taxonomy