ggKbase home page

L3_114_000M1_scaffold_8165

Search features with annotation key words

Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000M1_scaffold_8165_1
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..289
DNA (288bp) protein (96aa)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
adenylosuccinate synthase (EC:6.3.4.4)
Adenylosuccinate synthetase n=2 Tax=Clostridiales RepID=U2D1A6_9FIRM
L3_114_000M1_scaffold_8165_2
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

424..1245
DNA (822bp) protein (274aa)
Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED n=2 Tax=Ruminococcus RepID=D4LN67_9FIRM
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED {ECO:0000313|EMBL:CBL21278.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L3_114_000M1_scaffold_8165_3
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1521..1808)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7GUP8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE29652.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
L3_114_000M1_scaffold_8165_4
Roseburia sp. CAG:303, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2024..2239)
DNA (216bp) protein (72aa)
Transposase DDE domain n=1 Tax=Roseburia sp. CAG:303 RepID=R7IWN5_9FIRM
Transposase DDE domain {ECO:0000313|EMBL:CDE56044.1}; TaxID=1262944 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:303.;"
Transposase DDE domain.
L3_114_000M1_scaffold_8165_5
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2236..2874)
DNA (639bp) protein (213aa)
Transposase DDE domain n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KSM1_9FIRM
Transposase DDE domain.
Transposase DDE domain {ECO:0000313|EMBL:CBL09873.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_114_000M1_scaffold_8165_6
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3375..3467
DNA (93bp) protein (31aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N0V6_9FIRM
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CCY97650.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
Displaying 6 items

View Taxonomy