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L3_114_000M1_scaffold_3060

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000M1_scaffold_3060_1
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..297
DNA (297bp) protein (99aa)
ATP-dependent 6-phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339}; Short=ATP-PFK {ECO:0000256|HAMAP-Rule:MF_00339};; Short=Phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339};; EC=2.7.1.11 {ECO:0000256|HAMAP-Rule:MF_00339};; Phosphohexokinase {ECO:0000256|HAMAP-Rule:MF_00339}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
6-phosphofructokinase (EC:2.7.1.11)
6-phosphofructokinase n=1 Tax=Ruminococcus sp. JC304 RepID=UPI000360A06F
L3_114_000M1_scaffold_3060_2
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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301..1695
DNA (1395bp) protein (465aa)
H(+)-transporting two-sector ATPase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CQ30_9FIRM
H(+)-transporting two-sector ATPase {ECO:0000313|EMBL:CDD79737.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Trk-type K+ transport systems, membrane components
L3_114_000M1_scaffold_3060_3
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1770..2423
DNA (654bp) protein (218aa)
TrkA-N domain-containing protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CQN6_9FIRM
TrkA-N domain-containing protein {ECO:0000313|EMBL:CDD79738.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
K+ transport systems, NAD-binding component
L3_114_000M1_scaffold_3060_4
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2433..3206
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGW1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75765.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
rRNA methylases
L3_114_000M1_scaffold_3060_5
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3227..3661
DNA (435bp) protein (145aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JGW0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79742.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Membrane protein implicated in regulation of membrane protease activity
L3_114_000M1_scaffold_3060_6
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3664..4605
DNA (942bp) protein (314aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JGV9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75763.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Membrane protease subunits, stomatin/prohibitin homologs
L3_114_000M1_scaffold_3060_7
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4642..5643
DNA (1002bp) protein (334aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase n=2 Tax=Ruminococcus RepID=C6JGV8_9FIRM
L3_114_000M1_scaffold_3060_8
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5643..6446
DNA (804bp) protein (268aa)
birA, biotin-[acetyl-CoA-carboxylase] ligase region (EC:6.3.4.15)
Biotin-[acetyl-CoA-carboxylase] ligase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGV7_9FIRM
Biotin-[acetyl-CoA-carboxylase] ligase {ECO:0000313|EMBL:EES75761.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_114_000M1_scaffold_3060_9
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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6485..6850
DNA (366bp) protein (122aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JGV6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79746.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_114_000M1_scaffold_3060_10
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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6855..7862
DNA (1008bp) protein (336aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
tRNA-dihydrouridine synthase n=2 Tax=Ruminococcus RepID=C6JGV5_9FIRM
tRNA-U20-dihydrouridine synthase
L3_114_000M1_scaffold_3060_11
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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8088..8570
DNA (483bp) protein (161aa)
Transcription elongation factor GreA n=2 Tax=Ruminococcus RepID=C6JGV4_9FIRM
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
transcription elongation factor GreA
Displaying 11 items

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