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L3_114_000M1_scaffold_3064

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000M1_scaffold_3064_1
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..762
DNA (762bp) protein (254aa)
Collagenase and related proteases (EC:3.4.-.-)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JG83_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76062.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_114_000M1_scaffold_3064_2
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(801..1430)
DNA (630bp) protein (210aa)
RNA polymerase sigma factor n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CMD5_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
RNA polymerase, sigma 27/28 subunit, RpsK/SigK
L3_114_000M1_scaffold_3064_3
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1764..2420
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JG86_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76065.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_114_000M1_scaffold_3064_4
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2656..3636
DNA (981bp) protein (327aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
tRNA-dihydrouridine synthase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JG87_9FIRM
tRNA-U20a,U20b-dihydrouridine synthase
L3_114_000M1_scaffold_3064_5
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3738..4838
DNA (1101bp) protein (367aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JG88_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76067.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Predicted multitransmembrane protein
L3_114_000M1_scaffold_3064_6
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4835..5608
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JG89_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76068.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
YibE/F-like protein.
L3_114_000M1_scaffold_3064_7
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5966..7327
DNA (1362bp) protein (454aa)
MATE efflux family protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JG99_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EES76078.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
putative efflux protein, MATE family
L3_114_000M1_scaffold_3064_8
Firmicutes bacterium CAG:194, Firmicutes, Bacteria

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7521..7955
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0003670417
Uncharacterized protein {ECO:0000313|EMBL:CCZ27794.1}; TaxID=1263008 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:194.;"
hypothetical protein
L3_114_000M1_scaffold_3064_9
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8062..8883)
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J999_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78901.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Major Facilitator Superfamily.
Displaying 9 items

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