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L3_114_000M1_scaffold_3153

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000M1_scaffold_3153_1
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..112
DNA (111bp) protein (37aa)
Uncharacterized protein n=3 Tax=Ruminococcus RepID=T5M0R9_9FIRM
Conserved domain protein {ECO:0000313|EMBL:CDD79380.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Transglutaminase-like superfamily.
L3_114_000M1_scaffold_3153_2
unknown

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193..345
DNA (153bp) protein (51aa)

This feature has no annotations

L3_114_000M1_scaffold_3153_3
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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357..1013
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CME9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79379.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
O-6-methylguanine DNA methyltransferase
L3_114_000M1_scaffold_3153_4
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1047..1376
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8Q8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78710.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily
L3_114_000M1_scaffold_3153_5
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1557..3035
DNA (1479bp) protein (493aa)
Polyphosphate:AMP phosphotransferase n=2 Tax=Ruminococcus RepID=C6J8P3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79378.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_114_000M1_scaffold_3153_6
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3056..3787
DNA (732bp) protein (244aa)
Ribosomal RNA small subunit methyltransferase J {ECO:0000256|HAMAP-Rule:MF_01523}; EC=2.1.1.242 {ECO:0000256|HAMAP-Rule:MF_01523};; 16S rRNA m2G1516 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01523}; rRNA (guanine-N(2)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01523}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Ribosomal RNA small subunit methyltransferase J n=2 Tax=Ruminococcus RepID=C6J8P2_9FIRM
Protein of unknown function (DUF548).
L3_114_000M1_scaffold_3153_7
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3817..3984)
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=T5LZ21_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQM98891.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_114_000M1_scaffold_3153_8
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4295..5140
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8P1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78693.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Subtilisin-like serine proteases
L3_114_000M1_scaffold_3153_9
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5256..6464
DNA (1209bp) protein (403aa)
Isocitrate dehydrogenase [NADP] {ECO:0000256|PIRNR:PIRNR000108}; EC=1.1.1.42 {ECO:0000256|PIRNR:PIRNR000108};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
isocitrate dehydrogenase, NADP-dependent, eukaryotic type (EC:1.1.1.42)
Isocitrate dehydrogenase [NADP] n=2 Tax=Ruminococcus RepID=C6J8P0_9FIRM
L3_114_000M1_scaffold_3153_10
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6581..8491)
DNA (1911bp) protein (637aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6J8N9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79370.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ATPase components of ABC transporters with duplicated ATPase domains
L3_114_000M1_scaffold_3153_11
unknown

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8603..8692
DNA (90bp) protein (30aa)

This feature has no annotations

Displaying 11 items

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