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L3_114_000M1_scaffold_1132

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000M1_scaffold_1132_1
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(414..1559)
DNA (1146bp) protein (382aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JFX5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75954.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_114_000M1_scaffold_1132_2
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1849..2103)
DNA (255bp) protein (85aa)
HPr family phosphocarrier n=2 Tax=Ruminococcus RepID=C6JFX4_9FIRM
Phosphotransferase system {ECO:0000313|EMBL:CDD77947.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Phosphotransferase System HPr (HPr) Family
L3_114_000M1_scaffold_1132_3
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2100..3110)
DNA (1011bp) protein (337aa)
Putative sporulation transcription regulator WhiA n=2 Tax=Ruminococcus RepID=C6JFX3_9FIRM
Putative sporulation transcription regulator WhiA {ECO:0000256|HAMAP-Rule:MF_01420, ECO:0000256|SAAS:SAAS00005305}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_114_000M1_scaffold_1132_4
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3070..3957)
DNA (888bp) protein (296aa)
UPF0042 nucleotide-binding protein RSAG_02839 n=2 Tax=Ruminococcus RepID=C6JFX2_9FIRM
Nucleotide-binding protein BN806_01909 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Predicted P-loop-containing kinase
L3_114_000M1_scaffold_1132_5
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4050..4961)
DNA (912bp) protein (304aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
UDP-N-acetylmuramate dehydrogenase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFX1_9FIRM
L3_114_000M1_scaffold_1132_6
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5308..5727
DNA (420bp) protein (140aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JFX0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77955.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_114_000M1_scaffold_1132_7
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5845..6309
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CJN8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77957.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
SpoVA protein.
L3_114_000M1_scaffold_1132_8
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6379..7461
DNA (1083bp) protein (361aa)
Stage V sporulation protein AD n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFW8_9FIRM
Stage V sporulation protein AD {ECO:0000313|EMBL:EES75947.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Stage V sporulation protein AD (SpoVAD).
L3_114_000M1_scaffold_1132_9
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7492..7848
DNA (357bp) protein (119aa)
Stage V sporulation protein AE n=2 Tax=Ruminococcus RepID=C6JFW7_9FIRM
Stage V sporulation protein AE {ECO:0000313|EMBL:EES75946.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
SpoVA protein.
L3_114_000M1_scaffold_1132_10
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7855..8469
DNA (615bp) protein (205aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=R7CJP1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77962.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Stage V sporulation protein AA.
L3_114_000M1_scaffold_1132_11
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8538..9035
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CKV4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77963.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Predicted membrane protein
L3_114_000M1_scaffold_1132_12
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9018..9203)
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CJ19_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77965.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L3_114_000M1_scaffold_1132_13
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9208..9921)
DNA (714bp) protein (238aa)
RNA polymerase sigma factor n=2 Tax=Ruminococcus RepID=C6JFW4_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
RNA polymerase sigma factor, sigma-70 family/RNA polymerase sigma-70 factor, sigma-B/F/G subfamily
L3_114_000M1_scaffold_1132_14
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9924..10349)
DNA (426bp) protein (142aa)
anti-sigma F factor (EC:2.7.11.1)
Anti-sigma F factor n=2 Tax=Ruminococcus RepID=C6JFW3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77971.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L3_114_000M1_scaffold_1132_15
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10372..10686)
DNA (315bp) protein (105aa)
Anti-sigma F factor antagonist n=2 Tax=Ruminococcus RepID=C6JFW2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77972.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
anti-anti-sigma factor
L3_114_000M1_scaffold_1132_16
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10894..12231)
DNA (1338bp) protein (446aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CKW4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77973.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_114_000M1_scaffold_1132_17
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12242..12394)
DNA (153bp) protein (51aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JFW0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75939.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_114_000M1_scaffold_1132_18
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12391..13689)
DNA (1299bp) protein (433aa)
folylpolyglutamate synthase/dihydrofolate synthase (EC:6.3.2.17)
FolC protein n=2 Tax=Ruminococcus RepID=C6JFV9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77975.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L3_114_000M1_scaffold_1132_19
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13800..15836)
DNA (2037bp) protein (679aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CIV4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77976.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
L3_114_000M1_scaffold_1132_20
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(15849..18476)
DNA (2628bp) protein (876aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
valyl-tRNA synthetase (EC:6.1.1.9)
valyl-tRNA synthase n=1 Tax=Ruminococcus sp. JC304 RepID=UPI000302306D
Displaying 20 items

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