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L3_114_000M1_scaffold_1339

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000M1_scaffold_1339_1
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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291..1070
DNA (780bp) protein (260aa)
Uridine phosphorylase {ECO:0000256|RuleBase:RU361131}; EC=2.4.2.3 {ECO:0000256|RuleBase:RU361131};; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
uridine phosphorylase (EC:2.4.2.3)
Uridine phosphorylase n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9JWA8_9FIRM
L3_114_000M1_scaffold_1339_2
Blautia sp. CAG:237, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1109..1819
DNA (711bp) protein (237aa)
Purine nucleoside phosphorylase DeoD-type {ECO:0000256|HAMAP-Rule:MF_01627}; Short=PNP {ECO:0000256|HAMAP-Rule:MF_01627};; EC=2.4.2.1 {ECO:0000256|HAMAP-Rule:MF_01627};; TaxID=1262755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:237.;"
Purine nucleoside phosphorylase DeoD-type n=1 Tax=Blautia sp. CAG:237 RepID=R6L4E4_9FIRM
purine nucleoside phosphorylase
L3_114_000M1_scaffold_1339_3
Blautia sp. CAG:237, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1869..2534
DNA (666bp) protein (222aa)
Deoxyribose-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202}; Short=DERA {ECO:0000256|HAMAP-Rule:MF_00114};; EC=4.1.2.4 {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202};; 2-deoxy-D-ribose 5-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114}; Phosphodeoxyriboaldolase {ECO:0000256|HAMAP-Rule:MF_00114}; TaxID=1262755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:237.;"
deoxyribose-phosphate aldolase (EC:4.1.2.4)
Deoxyribose-phosphate aldolase n=1 Tax=Blautia sp. CAG:237 RepID=R6KY04_9FIRM
L3_114_000M1_scaffold_1339_4
Blautia sp. CAG:237, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2594..3022
DNA (429bp) protein (143aa)
cytidine deaminase (EC:3.5.4.5)
Cytidine deaminase n=1 Tax=Blautia sp. CAG:237 RepID=R6L878_9FIRM
Cytidine deaminase {ECO:0000313|EMBL:CDB78371.1}; TaxID=1262755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:237.;"
L3_114_000M1_scaffold_1339_5
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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3033..4223
DNA (1191bp) protein (397aa)
Phosphopentomutase {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00010015}; EC=5.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00009998};; Phosphodeoxyribomutase {ECO:0000256|HAMAP-Rule:MF_00740}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
phosphopentomutase (EC:5.4.2.7)
Phosphopentomutase n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9JTP6_9FIRM
L3_114_000M1_scaffold_1339_6
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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4504..5793
DNA (1290bp) protein (430aa)
seryl-tRNA synthetase (EC:6.1.1.11)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V3F5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77926.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L3_114_000M1_scaffold_1339_7
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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5941..6417
DNA (477bp) protein (159aa)
YbaK/proline--tRNA ligase associated domain protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GFN5_9FIRM
YbaK/proline--tRNA ligase associated domain protein {ECO:0000313|EMBL:EEU99369.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hypothetical protein
L3_114_000M1_scaffold_1339_8
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6414..7139
DNA (726bp) protein (242aa)
membrane protein n=1 Tax=Lachnospiraceae bacterium NK4A136 RepID=UPI0003B6AC2A
Uncharacterized protein {ECO:0000313|EMBL:EFE14555.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
hypothetical protein
L3_114_000M1_scaffold_1339_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7197..7691
DNA (495bp) protein (165aa)
NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding (EC:3.6.1.22)
Hydrolase, NUDIX family n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S8T6_9FIRM
Hydrolase, NUDIX family {ECO:0000313|EMBL:EDP22418.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L3_114_000M1_scaffold_1339_10
Clostridium sp. CAG:590, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7764..8354
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:590 RepID=R5E1Y6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX85219.1}; TaxID=1262825 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:590.;"
membrane protein
L3_114_000M1_scaffold_1339_11
unknown

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8624..8737
DNA (114bp) protein (38aa)

This feature has no annotations

L3_114_000M1_scaffold_1339_12
[Eubacterium] eligens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8993..9283
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) RepID=C4Z7R9_EUBE2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR73347.1}; TaxID=515620 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium eligens (strain ATCC 27750 / VPI C15-48).;"
L3_114_000M1_scaffold_1339_13
Eubacterium sp. CAG:248, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9255..9680
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:248 RepID=R6JWH7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB67153.1}; TaxID=1262885 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:248.;"
hypothetical protein
L3_114_000M1_scaffold_1339_14
Roseburia sp. CAG:100, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9740..10042)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:100 RepID=R7R3J5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF44436.1}; TaxID=1262940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:100.;"
aldo/keto reductase
L3_114_000M1_scaffold_1339_15
unknown

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comp(10014..10139)
DNA (126bp) protein (42aa)

This feature has no annotations

L3_114_000M1_scaffold_1339_16
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

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10424..10615
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EGL1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX91830.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
L3_114_000M1_scaffold_1339_17
unknown

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10612..10773
DNA (162bp) protein (54aa)

This feature has no annotations

L3_114_000M1_scaffold_1339_18
Clostridium sp. CAG:167, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11034..11165
DNA (132bp) protein (44aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:167 RepID=R5VMB7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ91600.1}; TaxID=1262777 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:167.;"
L3_114_000M1_scaffold_1339_19
Oribacterium asaccharolyticum, Oribacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11710..12675
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Oribacterium sp. oral taxon 108 str. F0425 RepID=F5T682_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL10937.1}; TaxID=796944 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Oribacterium.;" source="Oribacterium asaccharolyticum ACB7.;"
hypothetical protein
L3_114_000M1_scaffold_1339_20
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

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12795..14177
DNA (1383bp) protein (461aa)
Uncharacterized protein n=5 Tax=Bacteria RepID=B6FVQ2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA79888.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
transposase IS4 family protein
L3_114_000M1_scaffold_1339_21
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14514..14837)
DNA (324bp) protein (108aa)
Peptidase S24-like protein n=1 Tax=Clostridium sp. M62/1 RepID=D4C8F0_9CLOT
Peptidase S24-like protein {ECO:0000313|EMBL:EFE13787.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
Predicted transcriptional regulator
L3_114_000M1_scaffold_1339_22
Firmicutes bacterium CAG:95, Firmicutes, Bacteria

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15018..15623
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:95 RepID=R7N5N7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF07916.1}; TaxID=1262988 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:95.;"
hypothetical protein
L3_114_000M1_scaffold_1339_23
Firmicutes bacterium CAG:95, Firmicutes, Bacteria

Not on your lists

15623..15934
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:95 RepID=R7N519_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF07915.1}; TaxID=1262988 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:95.;"
hypothetical protein
L3_114_000M1_scaffold_1339_24
unknown

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15980..16138
DNA (159bp) protein (53aa)

This feature has no annotations

L3_114_000M1_scaffold_1339_25
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

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16531..16614
DNA (84bp) protein (28aa)
Putative uncharacterized protein n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GR88_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL40313.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
Displaying 25 items

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