ggKbase home page

L3_114_000M1_scaffold_1681

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000M1_scaffold_1681_1
unknown

Not on your lists

comp(2..70)
DNA (69bp) protein (23aa)

This feature has no annotations

L3_114_000M1_scaffold_1681_2
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(413..949)
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CIV5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78159.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_114_000M1_scaffold_1681_3
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1006..2739)
DNA (1734bp) protein (578aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JCK4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77498.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_114_000M1_scaffold_1681_4
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3117..3752)
DNA (636bp) protein (212aa)
Methanosarcina family methyltransferase cognate corrinoid protein n=2 Tax=Ruminococcus RepID=C6JCK5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD75923.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Predicted cobalamin binding protein
L3_114_000M1_scaffold_1681_5
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3829..4647)
DNA (819bp) protein (273aa)
Methyl corrinoid protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CDA1_9FIRM
Methyl corrinoid protein {ECO:0000313|EMBL:CDD75920.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Pterin binding enzyme.
L3_114_000M1_scaffold_1681_6
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4691..5725)
DNA (1035bp) protein (345aa)
Vanillate:corrinoid protein methyltransferase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CDW6_9FIRM
Vanillate:corrinoid protein methyltransferase {ECO:0000313|EMBL:CDD75917.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
uroporphyrinogen-III decarboxylase
L3_114_000M1_scaffold_1681_7
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6148..7074
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JCK8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77502.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_114_000M1_scaffold_1681_8
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7121..8089
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JCK9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77503.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_114_000M1_scaffold_1681_9
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8166..8612
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JCL0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77504.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_114_000M1_scaffold_1681_10
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8778..9908)
DNA (1131bp) protein (377aa)
malate dehydrogenase (NAD) (EC:1.1.1.37)
Malate/L-lactate dehydrogenase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CD92_9FIRM
Malate/L-lactate dehydrogenase {ECO:0000313|EMBL:CDD75910.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L3_114_000M1_scaffold_1681_11
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10312..11160
DNA (849bp) protein (283aa)
NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding (EC:3.6.1.22)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JCL2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77506.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_114_000M1_scaffold_1681_12
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11310..12464)
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CI16_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77849.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
DnaJ-class molecular chaperone with C-terminal Zn finger domain
L3_114_000M1_scaffold_1681_13
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12587..13054)
DNA (468bp) protein (156aa)
heat shock protein Hsp20 n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002E3CE2A
Uncharacterized protein {ECO:0000313|EMBL:EES77508.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_114_000M1_scaffold_1681_14
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13240..13707)
DNA (468bp) protein (156aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JCL5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77509.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
Displaying 14 items

View Taxonomy