ggKbase home page

L3_114_000M1_scaffold_1737

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000M1_scaffold_1737_1
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


903..1271
DNA (369bp) protein (123aa)
30S ribosomal protein S13 n=5 Tax=Clostridiales RepID=D4LMQ5_9FIRM
30S ribosomal protein S13
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
L3_114_000M1_scaffold_1737_2
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


1434..1829
DNA (396bp) protein (132aa)
30S ribosomal protein S11 n=2 Tax=Ruminococcus RepID=C6JG04_9FIRM
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
SSU ribosomal protein S11P
L3_114_000M1_scaffold_1737_3
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


1861..2454
DNA (594bp) protein (198aa)
30S ribosomal protein S4 n=2 Tax=Ruminococcus RepID=C6JG05_9FIRM
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
SSU ribosomal protein S4P
L3_114_000M1_scaffold_1737_4
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2601..3560
DNA (960bp) protein (320aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
DNA-directed RNA polymerase subunit alpha n=2 Tax=Ruminococcus RepID=C6JG06_9FIRM
DNA-directed RNA polymerase subunit alpha
L3_114_000M1_scaffold_1737_5
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


3699..4235
DNA (537bp) protein (179aa)
50S ribosomal protein L17 n=2 Tax=Ruminococcus RepID=C6JG07_9FIRM
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
LSU ribosomal protein L17P
L3_114_000M1_scaffold_1737_6
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4519..5406
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JG09_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75988.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_114_000M1_scaffold_1737_7
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5737..7071
DNA (1335bp) protein (445aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JG10_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76527.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
UDP-N-acetylmuramyl tripeptide synthase
L3_114_000M1_scaffold_1737_8
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7071..7793
DNA (723bp) protein (241aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JG11_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75990.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Predicted glutamine amidotransferase
L3_114_000M1_scaffold_1737_9
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7796..8437
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CE82_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76524.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_114_000M1_scaffold_1737_10
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8463..9977
DNA (1515bp) protein (505aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JG14_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75993.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
ABC-type xylose transport system, periplasmic component
L3_114_000M1_scaffold_1737_11
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10025..10597)
DNA (573bp) protein (191aa)
Xanthine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502}; Short=XPRTase {ECO:0000256|HAMAP-Rule:MF_01184};; EC=2.4.2.22 {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
xanthine phosphoribosyltransferase (EC:2.4.2.22)
Xanthine phosphoribosyltransferase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CFL1_9FIRM
L3_114_000M1_scaffold_1737_12
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10950..11177
DNA (228bp) protein (76aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JG16_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75995.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_114_000M1_scaffold_1737_13
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11308..11655
DNA (348bp) protein (116aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JG17_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76520.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_114_000M1_scaffold_1737_14
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11883..12713
DNA (831bp) protein (277aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JG18_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76519.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ATPases involved in chromosome partitioning
L3_114_000M1_scaffold_1737_15
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12790..13668)
DNA (879bp) protein (293aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JG19_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76518.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Transcriptional regulator
Displaying 15 items

View Taxonomy