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L3_114_000M1_scaffold_1818

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000M1_scaffold_1818_1
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..1375)
DNA (1374bp) protein (458aa)
(p)ppGpp synthetase, RelA/SpoT family (EC:2.7.6.5)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CSL9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80448.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L3_114_000M1_scaffold_1818_2
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1413..1937)
DNA (525bp) protein (175aa)
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084255};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
adenine phosphoribosyltransferase (EC:2.4.2.7)
Adenine phosphoribosyltransferase n=2 Tax=Ruminococcus RepID=C6J8B0_9FIRM
L3_114_000M1_scaffold_1818_3
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2085..3797)
DNA (1713bp) protein (571aa)
exonuclease RecJ (EC:3.1.-.-)
Single-stranded-DNA-specific exonuclease RecJ n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8B1_9FIRM
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:EES78563.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_114_000M1_scaffold_1818_4
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3879..6287)
DNA (2409bp) protein (803aa)
Protein-export membrane protein SecD n=2 Tax=Ruminococcus RepID=C6J8B2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80441.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
protein translocase subunit secF/protein translocase subunit secD
L3_114_000M1_scaffold_1818_5
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6399..7766)
DNA (1368bp) protein (456aa)
Six-Cys-in-45 modification radical SAM protein n=2 Tax=Ruminococcus RepID=C6J8B3_9FIRM
Six-Cys-in-45 modification radical SAM protein {ECO:0000313|EMBL:EES78565.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Arylsulfatase regulator (Fe-S oxidoreductase)
L3_114_000M1_scaffold_1818_6
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7847..7987)
DNA (141bp) protein (47aa)
RSAM-modified six-cysteine peptide SCIFF n=2 Tax=Ruminococcus RepID=C6J8B4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80439.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_114_000M1_scaffold_1818_7
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8061..8411)
DNA (351bp) protein (117aa)
TIGR04097 family integral membrane protein n=2 Tax=Ruminococcus RepID=C6J8B5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80438.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_114_000M1_scaffold_1818_8
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8461..9969)
DNA (1509bp) protein (503aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8B6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78568.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_114_000M1_scaffold_1818_9
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10314..11597
DNA (1284bp) protein (428aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8B7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78569.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_114_000M1_scaffold_1818_10
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11601..12203)
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8B8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78570.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_114_000M1_scaffold_1818_11
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12471..13232)
DNA (762bp) protein (254aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6J8B9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80433.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L3_114_000M1_scaffold_1818_12
unknown

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13359..13475
DNA (117bp) protein (39aa)

This feature has no annotations

Displaying 12 items

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