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L3_114_000M1_scaffold_1977

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000M1_scaffold_1977_1
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..140
DNA (138bp) protein (46aa)
SCP-2 sterol transfer family protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ELB0_9FIRM
SCP-2 sterol transfer family protein {ECO:0000313|EMBL:EEQ58449.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
SCP-2 sterol transfer family.
L3_114_000M1_scaffold_1977_2
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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210..1616
DNA (1407bp) protein (469aa)
ansB1; aspartate ammonia-lyase AnsB (EC:4.3.1.1)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HIY8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE98652.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
L3_114_000M1_scaffold_1977_3
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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1876..2706
DNA (831bp) protein (277aa)
Transcriptional regulator, AraC family n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ER40_9FIRM
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EEQ60484.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
AraC family transcriptional regulator
L3_114_000M1_scaffold_1977_4
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2876..4222
DNA (1347bp) protein (449aa)
Potassium uptake protein TrkH family n=1 Tax=Clostridium sp. CAG:7 RepID=R5IGI0_9CLOT
Potassium uptake protein TrkH family {ECO:0000313|EMBL:CCY41243.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Trk-type K+ transport systems, membrane components
L3_114_000M1_scaffold_1977_5
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4241..4888
DNA (648bp) protein (216aa)
TrkA-N domain protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5ILP7_9CLOT
TrkA-N domain protein {ECO:0000313|EMBL:CCY41244.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
K+ transport systems, NAD-binding component
L3_114_000M1_scaffold_1977_6
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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4885..5970
DNA (1086bp) protein (362aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PPT0_9FIRM
two-component system, OmpR family, sensor histidine kinase KdpD
L3_114_000M1_scaffold_1977_7
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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5963..6664
DNA (702bp) protein (234aa)
Two-component system, OmpR family, KDP operon response regulator KdpE n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XH21_9FIRM
Two-component system, OmpR family, KDP operon response regulator KdpE {ECO:0000313|EMBL:EGJ45660.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
kdpE; OmpR family two component system KDP operon response regulator
L3_114_000M1_scaffold_1977_8
Eubacterium sp. CAG:86, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6814..8148
DNA (1335bp) protein (445aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:86 RepID=R5DMC3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX81368.1}; TaxID=1262895 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:86.;"
putative efflux protein, MATE family
L3_114_000M1_scaffold_1977_9
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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9077..9952
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_37FAA RepID=E9RYC4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC74050.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
ParB-like partition proteins
L3_114_000M1_scaffold_1977_10
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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9968..10753
DNA (786bp) protein (262aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3APE3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG89038.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
ATPases involved in chromosome partitioning
L3_114_000M1_scaffold_1977_11
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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10743..11642
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_37FAA RepID=E9RXE0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC74099.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
ParB-like partition proteins
L3_114_000M1_scaffold_1977_12
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11733..12647
DNA (915bp) protein (305aa)
Uncharacterized protein n=2 Tax=unclassified Lachnospiraceae RepID=E9RXD9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC74098.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
Replication initiator protein A (RepA) N-terminus.
Displaying 12 items

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