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L3_114_000M1_scaffold_2057

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000M1_scaffold_2057_1
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..327
DNA (327bp) protein (109aa)
amino acid:cation symporter n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002E90137
Uncharacterized protein {ECO:0000313|EMBL:CDD77532.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Na+/H+-dicarboxylate symporters
L3_114_000M1_scaffold_2057_2
Firmicutes bacterium CAG:95, Firmicutes, Bacteria

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comp(397..1230)
DNA (834bp) protein (278aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI000309D8C5
Uncharacterized protein {ECO:0000313|EMBL:CDF08558.1}; TaxID=1262988 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:95.;"
binding-protein-dependent transport system inner membrane protein
L3_114_000M1_scaffold_2057_3
Firmicutes bacterium CAG:95, Firmicutes, Bacteria

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comp(1243..2139)
DNA (897bp) protein (299aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002F15560
ABC transporter permease protein {ECO:0000313|EMBL:CDF08559.1}; TaxID=1262988 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:95.;"
sugar ABC transporter, permease protein
L3_114_000M1_scaffold_2057_4
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2215..3522)
DNA (1308bp) protein (436aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002F41473
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EDN77960.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
family 1 extracellular solute-binding protein
L3_114_000M1_scaffold_2057_5
Lachnospiraceae bacterium 28-4, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3546..5555)
DNA (2010bp) protein (670aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI00031458B8
Uncharacterized protein {ECO:0000313|EMBL:EOS28880.1}; TaxID=397287 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 28-4.;"
beta-galactosidase trimerisation domain-containing protein
L3_114_000M1_scaffold_2057_6
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5654..7171)
DNA (1518bp) protein (506aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002D83631
Two component transcriptional regulator, AraC family protein {ECO:0000313|EMBL:EMS71649.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT1112.;"
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
L3_114_000M1_scaffold_2057_7
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7153..8934)
DNA (1782bp) protein (594aa)
Integral membrane sensor signal transduction histidine kinase {ECO:0000313|EMBL:EMS71645.1}; EC=2.7.13.3 {ECO:0000313|EMBL:EMS71645.1};; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT1112.;"
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002F3EBBD
sensor with HAMP domain
L3_114_000M1_scaffold_2057_8
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9030..9422)
DNA (393bp) protein (131aa)
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily. (EC:4.4.1.5)
glyoxalase n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002F1DD05
Uncharacterized protein {ECO:0000313|EMBL:EES77385.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_114_000M1_scaffold_2057_9
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9843..10358
DNA (516bp) protein (172aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002D5740B
Uncharacterized protein {ECO:0000313|EMBL:ERK31122.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
putative membrane protein
L3_114_000M1_scaffold_2057_10

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comp(10524..11996)
DNA (1473bp) protein (491aa)
Transposase n=1 Tax=Clostridium sp. D5 RepID=F0Z5Z5_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:ADD61930.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
ISNCY family transposase
Displaying 10 items

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