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L3_114_000M1_scaffold_2560

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000M1_scaffold_2560_1
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..291)
DNA (291bp) protein (97aa)
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase n=3 Tax=Lachnospiraceae RepID=A7B7F5_RUMGN
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:EGN48809.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L3_114_000M1_scaffold_2560_2
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(371..1897)
DNA (1527bp) protein (509aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7B7F6_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN48810.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_114_000M1_scaffold_2560_3
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1907..3256)
DNA (1350bp) protein (450aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7B7F7_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN48811.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_114_000M1_scaffold_2560_4
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3392..5836)
DNA (2445bp) protein (815aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EDN75901.1}; EC=2.4.-.- {ECO:0000313|EMBL:EDN75901.1};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Glycosyltransferase, group 2 family protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B7F8_RUMGN
Predicted glycosyltransferases
L3_114_000M1_scaffold_2560_5
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5846..6454)
DNA (609bp) protein (203aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7B7F9_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN48813.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L3_114_000M1_scaffold_2560_6
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6470..7204)
DNA (735bp) protein (245aa)
ABC transporter, ATP-binding protein n=3 Tax=Lachnospiraceae RepID=A7B7G0_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN48814.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
ABC transporter
L3_114_000M1_scaffold_2560_7
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7214..7990)
DNA (777bp) protein (259aa)
ABC-2 type transporter n=3 Tax=Lachnospiraceae RepID=A7B7G1_RUMGN
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
ABC-type polysaccharide/polyol phosphate export systems permease
L3_114_000M1_scaffold_2560_8
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8007..8558)
DNA (552bp) protein (184aa)
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3,5-epimerase n=3 Tax=Lachnospiraceae RepID=A7B7G2_RUMGN
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:ETD20715.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L3_114_000M1_scaffold_2560_9
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8574..9458)
DNA (885bp) protein (295aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
Glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24)
Glucose-1-phosphate thymidylyltransferase n=3 Tax=Lachnospiraceae RepID=A7B7G3_RUMGN
L3_114_000M1_scaffold_2560_10
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9540..10331)
DNA (792bp) protein (264aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase n=3 Tax=Lachnospiraceae RepID=A7B7G4_RUMGN
Displaying 10 items

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