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L3_114_000M1_scaffold_383_26

Organism: dasL3_114_000M1_concoct_44_fa

near complete RP 43 / 55 BSCG 43 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: 27735..31055

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.4
  • Coverage: 1106.0
  • Bit_score: 2173
  • Evalue 0.0
transcription-repair coupling factor (EC:3.6.1.-) similarity KEGG
DB: KEGG
  • Identity: 61.6
  • Coverage: 1118.0
  • Bit_score: 1374
  • Evalue 0.0
Transcription-repair-coupling factor n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGP5_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 99.4
  • Coverage: 1106.0
  • Bit_score: 2173
  • Evalue 0.0

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Taxonomy

Ruminococcus sp. 5_1_39BFAA → Ruminococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 3321
ATGAAAGCATTTTTAACACCTCTGCAGGGGCTTGCAGAGTTTGAACAGATTAAAGAAAAAAGCAAAACGAATAAGGGAATCCTGCAGGTTTCGGGGTGTATGGAATCGCAGAAATCTCATCTGATGTACGGACTTTCCGGGATTGCGCCTTATCGTCTGATCTTGGCGGAGGATGAACGCCGCGCCAGAGAAATTTATGAAGATTACAGATTTTATGACAGAAAAGTGTATTCTTATCCTGCGAAAGATCTTCTGTTCTTTCAGGCAGATATCCATGGAAATCTGCTGATACGTCAGAGGATGAAGGTCATTAAGGCGTTACTGGAAGAGAAAGAACTGACAGTTGTTACAAGTATTGACGGATGTATGGATTTTCTGGAATCTCTGGAAAAGATAAAAGAACAGCTGATTCATTACGAAAGTGACAGCACCGTAGACACAGAACAGCTGAAGAACCAGCTGGTGGCTTTAGGTTACGAGCGGGTAGGACAGGTGGAAATGCCGGGGCAGTTCTCTGTGCGTGGCGGTATTGTGGATATTTACTGTCTCACTGAGGAAAATCCATGGAGAATCGAGCTTTGGGGAGATGAGATTGATTCTATCCGGAGTTTTGATCCGGAGAGTCAGCGTTCTCTGGAAAATCTGGAAGAACTTACGATCTATCCGGCGGTGGAGCATATAGGGGACAAGGATATGGTTTCCTTCCTGGATTATTTTCCGGAGGAAAGAACCATAATCTTTCTGGATGAACCAAACCGACTGACTGAGAAAGGCGGGGCTGTAGAAGAAGAGTACAGACAGAGCCGTATGCACAGAGAGGAAAAAGGCAGCCGGAATCTGCCGGAAAACTGGCTTTGTTCTTTTGAACAGCTTCAAAAAGAACTGAATAAACGCAACTGTATTTCTGTATGTGCGCTGGAACCGAAACAGGCAGGCTGGAAAGTGCGGGAGAAATTTTACCTGGAGGTAAAATCAATCAGCGCTTATAACAACAGTTTTGAACTTCTGGTAAAAGATCTTCATCAGTATAAGAAACAGGGATACAGGATCGCGTTGCTTTCCGGTTCCCGCACAAGGGCCGAGAGGCTGGCAAAGGATCTTCAGGAAGAGGGACTGGCAGCCTTTTATGGACAAGATTATGACAGGGAGATCTGTCCGGGCGAGATCATGGTGGTTTATGGCCATGCAAAGAAGGGCTTTGAATACCCGTTGATCAAGTTTGCGGTAATGACAGAATCTGACATTTTTGGACAGGAACAGAAGAAGAAAAAGAAGAAAAAAAATTACAGTGGAAGCCGTATTCAGGATTTTGCGGAGCTTTCTATCGGCGATTTTGTTGTCCATGAAAAGCATGGCCTTGGTATTTACCGAGGAATTGAAAAAGTTGAAGTAGACAGGATCGTTAAAGATTATATTAAAATTGAATACAGAGGCGGAAGCAATCTCTATATTCCTGCTACTCAGCTTGACTGTCTGCAGAAATATTCAGGGGCAGATGCTGCAAAGGCTCCGAAGCTGAACAAACTTGGTACTCAGGAGTGGAATAAAACAAAGAGCAAGGTTCGTGGGGCAGTTAAAAATATTGCAAAAGAATTGGTAGAGCTTTATGCAGTGCGTCAGGAAAAGGAAGGATATGTCTGTGGTCCTGATACTGTATGGCAGAGAGAATTTGAAGAAATGTTTCCATATGAAGAGACAGAGGATCAGCTCAGTGCTATTGAGGATGCCAAACGTGATATGGAGAGTACCAGGATTATGGACCGGCTTATCTGCGGGGATGTGGGATACGGCAAAACAGAAGTGGCGCTACGTGCCGCATTTAAGGAAGTACAGGAGAGCAGACAGGTAGCTTATCTTGCACCTACAACGATCCTTGCGCAGCAGATTTATAATACCTTTGTGCAGAGGATGAAGGAATTTCCGGTACGTGTGGAACTGTTGTGCAGATTCCGGACCCCGGCACAACAGAAGAAGGCAATCGAAGATCTGAAAAAAGGTCAGGTGGATGTGATCATTGGAACGCACAGAATCCTTTCCAAAGACGTACAGTTCAAAAATCTTGGCCTGTTGATCGTTGATGAGGAACAGCGGTTTGGAGTTACGCATAAGGAAAAAATCAAGCAGTTAAAGAAGGATGTGGATGTCCTTACACTGACTGCAACGCCCATTCCCCGTACTCTTCATATGAGCCTGATCGGAATCCGGGATATGAGTGTTCTGGAGGAACCTCCTATGGACAGAATGCCGATCCAGACATATGTTATGGAATATGATGAAGAGACAGTCCGAGAGGCTATCAACAGGGAATTGCGCAGAGGCGGACAGGTTTATTATGTTTATAATCGAGTGACGGATATTGCAGATGTTGCCCTGCGTATTGCGAAGCTGGTGCCGGACGCAAGGGTGGATTTTGCTCATGGCCAGATGAGTGAGAGGGAACTGGAGAATGTGATGTATTCCTTTGTAAACGGGGATATTGATGTGCTGGTTTCCACCACGATCATTGAGACAGGGCTGGATATTTCCAATGTAAATACTATGATTATCCATGATTCAGACAGATACGGGCTTTCTCAGCTTTATCAGCTTCGGGGAAGGATCGGGCGTTCCAACAGAACTGCCTATGCGTTTCTGATGTACAGAAAGAATGTGATGCTGAAGGAGACGGCTGAGAAGCGTCTGGCTGCGATCCGCGAGTATACGGATCTGGGAAGCGGATTTAAGATTGCAATGAGAGATCTGGAACTTCGAGGTGCCGGAAATCTGCTGGGTGCGCAGCAACATGGACATATGAATGCGGTTGGATATGATCTTTATTGTAAGATGCTCAATGAAGCAGTGAAAGAGGCGAAGGGTATTCGTACAATGGAGGATTTCGAGACATCGGTTGATCTGAATGTTGATGCGTATATTCCTGATTCCTACATCAGTAATGAATTTCAGAAGCTGGATATTTATAAAAGAATTGCGGGGATTGAGACACAACAGGATTATGATGATATGCTGGAAGAACTTCTGGACCGTTTCGGAGAACCCGGAAAGGCAGTGCTGAATCTTCTGGCGATTGCGAAGTTAAAGGCGATTGCTCATCAGGGGTACGTAACGGAAATAAAGCAGACTGGAAAAAAAGTCCGGTTTACCCTTTATGAGAAAGCAAGGCTGAATACAGAAGGCTTTCCGGCTCTTATGCAGAAATACAGAAGAGGTCTGCAGTTTAAGAATGAGCAGGAACCGAAATTTATCCTGGAACCACAGGGGAATCTGATCCTGGCATTGACGGAATTTGCAGAGGAGCTTAAGAGCATGGCGGAAAATATGTGA
PROTEIN sequence
Length: 1107
MKAFLTPLQGLAEFEQIKEKSKTNKGILQVSGCMESQKSHLMYGLSGIAPYRLILAEDERRAREIYEDYRFYDRKVYSYPAKDLLFFQADIHGNLLIRQRMKVIKALLEEKELTVVTSIDGCMDFLESLEKIKEQLIHYESDSTVDTEQLKNQLVALGYERVGQVEMPGQFSVRGGIVDIYCLTEENPWRIELWGDEIDSIRSFDPESQRSLENLEELTIYPAVEHIGDKDMVSFLDYFPEERTIIFLDEPNRLTEKGGAVEEEYRQSRMHREEKGSRNLPENWLCSFEQLQKELNKRNCISVCALEPKQAGWKVREKFYLEVKSISAYNNSFELLVKDLHQYKKQGYRIALLSGSRTRAERLAKDLQEEGLAAFYGQDYDREICPGEIMVVYGHAKKGFEYPLIKFAVMTESDIFGQEQKKKKKKKNYSGSRIQDFAELSIGDFVVHEKHGLGIYRGIEKVEVDRIVKDYIKIEYRGGSNLYIPATQLDCLQKYSGADAAKAPKLNKLGTQEWNKTKSKVRGAVKNIAKELVELYAVRQEKEGYVCGPDTVWQREFEEMFPYEETEDQLSAIEDAKRDMESTRIMDRLICGDVGYGKTEVALRAAFKEVQESRQVAYLAPTTILAQQIYNTFVQRMKEFPVRVELLCRFRTPAQQKKAIEDLKKGQVDVIIGTHRILSKDVQFKNLGLLIVDEEQRFGVTHKEKIKQLKKDVDVLTLTATPIPRTLHMSLIGIRDMSVLEEPPMDRMPIQTYVMEYDEETVREAINRELRRGGQVYYVYNRVTDIADVALRIAKLVPDARVDFAHGQMSERELENVMYSFVNGDIDVLVSTTIIETGLDISNVNTMIIHDSDRYGLSQLYQLRGRIGRSNRTAYAFLMYRKNVMLKETAEKRLAAIREYTDLGSGFKIAMRDLELRGAGNLLGAQQHGHMNAVGYDLYCKMLNEAVKEAKGIRTMEDFETSVDLNVDAYIPDSYISNEFQKLDIYKRIAGIETQQDYDDMLEELLDRFGEPGKAVLNLLAIAKLKAIAHQGYVTEIKQTGKKVRFTLYEKARLNTEGFPALMQKYRRGLQFKNEQEPKFILEPQGNLILALTEFAEELKSMAENM*