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L3_114_000M1_scaffold_383

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000M1_scaffold_383_1
unknown

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2..166
DNA (165bp) protein (55aa)

This feature has no annotations

L3_114_000M1_scaffold_383_2
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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499..1473
DNA (975bp) protein (325aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002FD8D14
Uncharacterized protein {ECO:0000313|EMBL:EQM98840.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_114_000M1_scaffold_383_3
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1630..2895)
DNA (1266bp) protein (422aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002E8D406
hypothetical protein
Putative ATPase {ECO:0000313|EMBL:ACL18194.1}; TaxID=272564 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium hafniense (strain DCB-2 / DSM 10664).;"
L3_114_000M1_scaffold_383_4
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3193..4698
DNA (1506bp) protein (502aa)
resolvase n=1 Tax=Ruminococcus sp. JC304 RepID=UPI000301D84C
Uncharacterized protein {ECO:0000313|EMBL:CDD78001.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Site-specific recombinases, DNA invertase Pin homologs
L3_114_000M1_scaffold_383_5
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4764..5510)
DNA (747bp) protein (249aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000256|RuleBase:RU361267}; EC=2.3.1.51 {ECO:0000256|RuleBase:RU361267};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
1-acyl-sn-glycerol-3-phosphate acyltransferases (EC:2.3.1.51)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CKZ2_9FIRM
L3_114_000M1_scaffold_383_6
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5764..6186
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CJ48_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78005.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_114_000M1_scaffold_383_7
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6209..7759
DNA (1551bp) protein (517aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGR4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75718.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
LysM domain.
L3_114_000M1_scaffold_383_8
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7919..8797
DNA (879bp) protein (293aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
4-diphosphocytidyl-2C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CIF3_9FIRM
L3_114_000M1_scaffold_383_9
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8787..9506
DNA (720bp) protein (240aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JGR2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78010.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
transcriptional regulator, GntR family
L3_114_000M1_scaffold_383_10
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9552..11174
DNA (1623bp) protein (541aa)
GerA spore germination protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CJT0_9FIRM
GerA spore germination protein {ECO:0000313|EMBL:CDD78012.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Bacillus/Clostridium GerA spore germination protein.
L3_114_000M1_scaffold_383_11
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11171..12856
DNA (1686bp) protein (562aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CL01_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78013.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Spore germination protein.
L3_114_000M1_scaffold_383_12
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12987..13262
DNA (276bp) protein (92aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JGQ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78014.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L3_114_000M1_scaffold_383_13
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13305..14126
DNA (822bp) protein (274aa)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
glutamate racemase (EC:5.1.1.3)
Glutamate racemase n=2 Tax=Ruminococcus RepID=C6JGQ8_9FIRM
L3_114_000M1_scaffold_383_14
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14208..14654
DNA (447bp) protein (149aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JGQ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75711.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_114_000M1_scaffold_383_15
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14778..15233)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CJT5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78017.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_114_000M1_scaffold_383_16
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15583..17301
DNA (1719bp) protein (573aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGQ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75709.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_114_000M1_scaffold_383_17
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17338..18792
DNA (1455bp) protein (485aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CIG2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75708.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Polysaccharide deacetylase.
L3_114_000M1_scaffold_383_18
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18802..20091
DNA (1290bp) protein (430aa)
Trigger factor n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGQ3_9FIRM
Trigger factor {ECO:0000256|RuleBase:RU003914}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
trigger factor
L3_114_000M1_scaffold_383_19
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20208..21560
DNA (1353bp) protein (451aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGQ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75706.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Predicted xylanase/chitin deacetylase
L3_114_000M1_scaffold_383_20
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21974..23860
DNA (1887bp) protein (629aa)
1,4-alpha-glucan branching enzyme GlgB {ECO:0000256|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000256|HAMAP-Rule:MF_00685};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase {ECO:0000256|HAMAP-Rule:MF_00685}; Alpha-(1->4)-glucan branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; Glycogen branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase (EC:2.4.1.18)
1,4-alpha-glucan branching enzyme GlgB n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGQ1_9FIRM
L3_114_000M1_scaffold_383_21
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24074..24307
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CM31_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78433.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_114_000M1_scaffold_383_22
unknown

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24335..24514
DNA (180bp) protein (60aa)

This feature has no annotations

L3_114_000M1_scaffold_383_23
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24644..25783
DNA (1140bp) protein (380aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CL23_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78437.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Putative GTPases (G3E family)
L3_114_000M1_scaffold_383_24
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25940..26890
DNA (951bp) protein (317aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JGP7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78439.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Putative GTPases (G3E family)
L3_114_000M1_scaffold_383_25
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27054..27635
DNA (582bp) protein (194aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase n=2 Tax=Ruminococcus RepID=C6JGP6_9FIRM
L3_114_000M1_scaffold_383_26
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27735..31055
DNA (3321bp) protein (1107aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
transcription-repair coupling factor (EC:3.6.1.-)
Transcription-repair-coupling factor n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGP5_9FIRM
L3_114_000M1_scaffold_383_27
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31052..32419
DNA (1368bp) protein (456aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CJP6_9FIRM
FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)
L3_114_000M1_scaffold_383_28
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32608..33408)
DNA (801bp) protein (267aa)
Hydrolase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CKF0_9FIRM
Hydrolase {ECO:0000313|EMBL:CDD78445.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
HAD-superfamily hydrolase, subfamily IIB
L3_114_000M1_scaffold_383_29
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33398..34594)
DNA (1197bp) protein (399aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CK89_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78446.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_114_000M1_scaffold_383_30
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34813..35331
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CL32_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78447.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Nitroreductase
Displaying items 1-30 of 31 in total

View Taxonomy