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L3_114_000M1_scaffold_217

Search features with annotation key words

Displaying items 1-30 of 35 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000M1_scaffold_217_1
Clostridium sp. CAG:568, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..579)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:568 RepID=R5ZT98_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA37736.1}; TaxID=1262821 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:568.;"
phnL; ABC transporter ATPase
L3_114_000M1_scaffold_217_2
unknown

Not on your lists

comp(576..827)
DNA (252bp) protein (84aa)

This feature has no annotations

L3_114_000M1_scaffold_217_3
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(975..3884)
DNA (2910bp) protein (970aa)
bgl5; beta-glucosidase (EC:3.2.1.21)
Glycosyl hydrolase family 3 protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6R8A6_9FIRM
Glycosyl hydrolase family 3 protein {ECO:0000313|EMBL:CDC30697.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
L3_114_000M1_scaffold_217_4
unknown

Not on your lists

comp(3881..4321)
DNA (441bp) protein (147aa)

This feature has no annotations

L3_114_000M1_scaffold_217_5
Clostridium sp. CAG:568, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4337..5497)
DNA (1161bp) protein (387aa)
Putative listeria/Bacterioides repeat-containing domain protein n=1 Tax=Clostridium sp. CAG:568 RepID=R5ZAE4_9CLOT
Putative listeria/Bacterioides repeat-containing domain protein {ECO:0000313|EMBL:CDA36673.1}; TaxID=1262821 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:568.;"
putative extracellular nuclease, surface-anchored
L3_114_000M1_scaffold_217_6
GWE2_Tenericutes_38_8_curated, Tenericutes, Bacteria

Not on your lists

comp(5576..9640)
DNA (4065bp) protein (1355aa)
Beta-glucosidase-related glycosidases (EC:3.2.1.21)
3 N domain protein glycosyl hydrolase family n=1 Tax=Clostridium sp. CAG:568 RepID=R5ZJ94_9CLOT
Tax=GWE2_Tenericutes_38_8_curated
L3_114_000M1_scaffold_217_7
Butyrivibrio fibrisolvens, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9802..10545)
DNA (744bp) protein (248aa)
Response regulator of the LytR/AlgR family n=1 Tax=Butyrivibrio fibrisolvens 16/4 RepID=D4IYT1_BUTFI
Response regulator of the LytR/AlgR family
Response regulator of the LytR/AlgR family {ECO:0000313|EMBL:CBK73020.1}; TaxID=657324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio fibrisolvens 16/4.;"
L3_114_000M1_scaffold_217_8
Eubacterium sp. CAG:581, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10551..11882)
DNA (1332bp) protein (444aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:581 RepID=R7NPI5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF14008.1}; TaxID=1262890 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:581.;"
hypothetical protein
L3_114_000M1_scaffold_217_9
Clostridium sp. CAG:568, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11936..12499)
DNA (564bp) protein (188aa)
ABC superfamily ATP binding cassette transporter ABC protein n=1 Tax=Clostridium sp. CAG:568 RepID=R5ZD48_9CLOT
ABC superfamily ATP binding cassette transporter ABC protein {ECO:0000313|EMBL:CDA37738.1}; TaxID=1262821 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:568.;"
L3_114_000M1_scaffold_217_10
Clostridium sp. CAG:510, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12944..13879
DNA (936bp) protein (312aa)
Abortive infection bacteriophage resistance protein n=1 Tax=Clostridium sp. CAG:510 RepID=R6CQI7_9CLOT
Abortive infection bacteriophage resistance protein {ECO:0000313|EMBL:CDA67482.1}; TaxID=1262816 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:510.;"
hypothetical protein
L3_114_000M1_scaffold_217_11
Mycoplasma hyosynoviae, Mycoplasma, Mycoplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(14128..17295)
DNA (3168bp) protein (1056aa)
type I site-specific deoxyribonuclease, HsdR family (EC:3.1.21.3)
Type I site-specific deoxyribonuclease, HsdR family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJZ0_9FIRM
Type I restriction endonuclease {ECO:0000313|EMBL:KDE45437.1}; TaxID=29559 species="Bacteria; Tenericutes; Mollicutes; Mycoplasmataceae; Mycoplasma.;" source="Mycoplasma hyosynoviae.;"
L3_114_000M1_scaffold_217_12
Scardovia wiggsiae, Scardovia, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17302..19071)
DNA (1770bp) protein (590aa)
KAP P-loop domain protein, putative n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C37E3B
Uncharacterized protein {ECO:0000313|EMBL:EJD64969.1}; TaxID=857290 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Scardovia.;" source="Scardovia wiggsiae F0424.;"
hypothetical protein
L3_114_000M1_scaffold_217_13
Mycoplasma hyosynoviae, Mycoplasma, Mycoplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(19068..20186)
DNA (1119bp) protein (373aa)
Type I restriction endonuclease subunit S n=1 Tax=Mycoplasma gallisepticum S6 RepID=V5W1R9_MYCGL
Uncharacterized protein {ECO:0000313|EMBL:KDE41858.1}; TaxID=29559 species="Bacteria; Tenericutes; Mollicutes; Mycoplasmataceae; Mycoplasma.;" source="Mycoplasma hyosynoviae.;"
type I restriction endonuclease subunit S
L3_114_000M1_scaffold_217_14
Mycoplasma hyosynoviae, Mycoplasma, Mycoplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(20173..21852)
DNA (1680bp) protein (560aa)
type I restriction-modification system, M subunit (EC:2.1.1.72)
Type I restriction-modification system, M subunit n=1 Tax=Treponema primitia (strain ATCC BAA-887 / DSM 12427 / ZAS-2) RepID=F5YI20_TREPZ
DNA methyltransferase {ECO:0000313|EMBL:KDE45625.1}; TaxID=29559 species="Bacteria; Tenericutes; Mollicutes; Mycoplasmataceae; Mycoplasma.;" source="Mycoplasma hyosynoviae.;"
L3_114_000M1_scaffold_217_15
Clostridium sp. CAG:568, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21843..22091)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:568 RepID=R5ZG98_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA37805.1}; TaxID=1262821 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:568.;"
XRE family transcriptional regulator
L3_114_000M1_scaffold_217_16
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23217..25319
DNA (2103bp) protein (701aa)
Uncharacterized protein n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JSV7_CELLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ84078.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L3_114_000M1_scaffold_217_17
Succinatimonas hippei, Succinatimonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26324..27604)
DNA (1281bp) protein (427aa)
Uncharacterized protein n=1 Tax=Succinatimonas hippei YIT 12066 RepID=E8LHZ6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EFY07817.1}; TaxID=762983 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Succinivibrionaceae; Succinatimonas.;" source="Succinatimonas hippei YIT 12066.;"
hypothetical protein
L3_114_000M1_scaffold_217_18
Clostridium sp. CAG:568, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27736..27984)
DNA (249bp) protein (83aa)
ABC superfamily ATP binding cassette transporter ABC protein n=1 Tax=Clostridium sp. CAG:568 RepID=R5ZD48_9CLOT
ABC superfamily ATP binding cassette transporter ABC protein {ECO:0000313|EMBL:CDA37738.1}; TaxID=1262821 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:568.;"
L3_114_000M1_scaffold_217_19
Treponema succinifaciens, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

28681..29655
DNA (975bp) protein (325aa)
Ribonuclease 3; EC=3.1.26.3;; Ribonuclease III; Short=RNase III;; TaxID=869209 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema succinifaciens (strain ATCC 33096 / DSM 2489 / 6091).;"
Ribonuclease 3 n=1 Tax=Treponema succinifaciens (strain ATCC 33096 / DSM 2489 / 6091) RepID=RNC_TRES6
ribonuclease III
L3_114_000M1_scaffold_217_20
Bacillus amyloliquefaciens, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(30239..33007)
DNA (2769bp) protein (923aa)
Putative helicase n=1 Tax=Bacillus licheniformis 9945A RepID=R9U150_BACLI
putative helicase
Helicase {ECO:0000313|EMBL:KJD54273.1}; TaxID=1390 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus amyloliquefaciens (Bacillus velezensis).;"
L3_114_000M1_scaffold_217_21
unknown

Not on your lists

comp(33453..33566)
DNA (114bp) protein (38aa)

This feature has no annotations

L3_114_000M1_scaffold_217_22
Eubacterium sp. CAG:841, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33876..35270
DNA (1395bp) protein (465aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:841 RepID=R7FQ78_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE17464.1}; TaxID=1262894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:841.;"
KAP family P-loop domain protein
L3_114_000M1_scaffold_217_23
unknown

Not on your lists

35454..35606
DNA (153bp) protein (51aa)

This feature has no annotations

L3_114_000M1_scaffold_217_24
unknown

Not on your lists

comp(35608..35994)
DNA (387bp) protein (129aa)

This feature has no annotations

L3_114_000M1_scaffold_217_25
unknown

Not on your lists

comp(36072..36386)
DNA (315bp) protein (105aa)

This feature has no annotations

L3_114_000M1_scaffold_217_26
Firmicutes bacterium CAG:631, Firmicutes, Bacteria

Not on your lists

comp(36650..37384)
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:631 RepID=R5VX67_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ85077.1}; TaxID=1262996 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:631.;"
L3_114_000M1_scaffold_217_27
Sulfurospirillum barnesii, Sulfurospirillum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

37619..39757
DNA (2139bp) protein (713aa)
Uncharacterized protein n=1 Tax=Sulfurospirillum barnesii (strain ATCC 700032 / DSM 10660 / SES-3) RepID=I3Y098_SULBS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL69622.1}; TaxID=760154 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Sulfurospirillum.;" source="Sulfurospirillum barnesii (strain ATCC 700032 / DSM 10660 / SES-3).;"
L3_114_000M1_scaffold_217_28
unknown

Not on your lists

comp(39925..40158)
DNA (234bp) protein (78aa)

This feature has no annotations

L3_114_000M1_scaffold_217_29
unknown

Not on your lists

comp(41150..41560)
DNA (411bp) protein (137aa)

This feature has no annotations

L3_114_000M1_scaffold_217_30
Clostridium sp. CAG:451, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(41757..43553)
DNA (1797bp) protein (599aa)
BH4001 protein n=1 Tax=Clostridium sp. CAG:451 RepID=R7KCJ5_9CLOT
BH4001 protein {ECO:0000313|EMBL:CDE74085.1}; TaxID=1262809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:451.;"
hypothetical protein
Displaying items 1-30 of 35 in total

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