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L3_114_000M1_scaffold_2916

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000M1_scaffold_2916_1
Firmicutes bacterium CAG:345, Firmicutes, Bacteria

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comp(55..639)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:345 RepID=R6Y4Y4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD23726.1}; TaxID=1263020 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:345.;"
L3_114_000M1_scaffold_2916_2
unknown

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comp(656..1042)
DNA (387bp) protein (129aa)

This feature has no annotations

L3_114_000M1_scaffold_2916_3
Clostridium sp. CAG:568, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1631..2551
DNA (921bp) protein (307aa)
Tagatose-6-phosphate kinase {ECO:0000256|PIRNR:PIRNR000535}; EC=2.7.1.144 {ECO:0000256|PIRNR:PIRNR000535};; TaxID=1262821 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:568.;"
pfkB; 1-phosphofructokinase (EC:2.7.1.56)
Tagatose-6-phosphate kinase n=1 Tax=Clostridium sp. CAG:568 RepID=R6A9B6_9CLOT
L3_114_000M1_scaffold_2916_4
Clostridium sp. CAG:568, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2552..3028)
DNA (477bp) protein (159aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=1262821 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:568.;"
Ribosomal RNA large subunit methyltransferase H n=1 Tax=Clostridium sp. CAG:568 RepID=R5ZT67_9CLOT
rRNA large subunit methyltransferase
L3_114_000M1_scaffold_2916_5
Clostridium sp. CAG:568, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3025..3801)
DNA (777bp) protein (259aa)
Metallo-beta-lactamase domain protein n=1 Tax=Clostridium sp. CAG:568 RepID=R5ZFX9_9CLOT
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:CDA37695.1}; TaxID=1262821 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:568.;"
metallo-beta-lactamase family protein
L3_114_000M1_scaffold_2916_6
Clostridium sp. CAG:568, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3825..5333)
DNA (1509bp) protein (503aa)
Replicative DNA helicase n=1 Tax=Clostridium sp. CAG:568 RepID=R5ZMB9_9CLOT
Replicative DNA helicase {ECO:0000313|EMBL:CDA37694.1}; TaxID=1262821 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:568.;"
replicative DNA helicase
L3_114_000M1_scaffold_2916_7
Clostridium sp. CAG:568, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5369..5824)
DNA (456bp) protein (152aa)
50S ribosomal protein L9 n=1 Tax=Clostridium sp. CAG:568 RepID=R5ZD15_9CLOT
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=1262821 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:568.;"
50S ribosomal protein L9
L3_114_000M1_scaffold_2916_8
Clostridium sp. CAG:568, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5827..7875)
DNA (2049bp) protein (683aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:568 RepID=R6A9B0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA37692.1}; TaxID=1262821 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:568.;"
putative signal transduction phosphoesterase YybT
L3_114_000M1_scaffold_2916_9
Clostridium sp. CAG:568, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8016..8621
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:568 RepID=R5ZT63_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA37691.1}; TaxID=1262821 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:568.;"
Sua5/YciO/YrdC/YwlC family protein
L3_114_000M1_scaffold_2916_10
Clostridium sp. CAG:568, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8640..9077
DNA (438bp) protein (146aa)
ribose-5-phosphate isomerase (EC:5.3.1.6)
Ribose 5-phosphate isomerase B n=1 Tax=Clostridium sp. CAG:568 RepID=R5ZFX3_9CLOT
Ribose 5-phosphate isomerase B {ECO:0000313|EMBL:CDA37690.1}; TaxID=1262821 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:568.;"
Displaying 10 items

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