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L3_114_000M1_scaffold_170

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Displaying items 1-30 of 50 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_000M1_scaffold_170_1
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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29..1762
DNA (1734bp) protein (578aa)
Pyruvate oxidase {ECO:0000313|EMBL:EKS53962.1}; EC=1.2.5.1 {ECO:0000313|EMBL:EKS53962.1};; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
Pyruvate oxidase n=2 Tax=Lactobacillus rhamnosus RepID=K8QDJ7_LACRH
thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein
L3_114_000M1_scaffold_170_2
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1976..2263)
DNA (288bp) protein (96aa)
Uncharacterized protein n=3 Tax=Lactobacillus rhamnosus RepID=S4ZUX9_LACRH
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKS53963.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L3_114_000M1_scaffold_170_3
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2466..3479)
DNA (1014bp) protein (338aa)
Beta-lactamase class C and other penicillin binding protein n=2 Tax=Lactobacillus rhamnosus RepID=S4ZS28_LACRH
Beta-lactamase class C and other penicillin binding protein
Beta-lactamase class C and other penicillin binding protein {ECO:0000313|EMBL:EKS53964.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L3_114_000M1_scaffold_170_4
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3522..4589)
DNA (1068bp) protein (356aa)
Muconate cycloisomerase {ECO:0000313|EMBL:EKS53965.1}; EC=5.5.1.1 {ECO:0000313|EMBL:EKS53965.1};; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
Muconate cycloisomerase n=2 Tax=Lactobacillus rhamnosus RepID=K8QN61_LACRH
ykfB; L-alanine-DL-glutamate epimerase-like protein
L3_114_000M1_scaffold_170_5
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4628..4789
DNA (162bp) protein (54aa)
Uncharacterized protein n=4 Tax=Lactobacillus rhamnosus RepID=C7TGM7_LACRL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP73215.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_114_000M1_scaffold_170_6
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4773..5507
DNA (735bp) protein (245aa)
Methyltransferase n=1 Tax=Lactobacillus rhamnosus MTCC 5462 RepID=F3MXJ4_LACRH
Methyltransferase {ECO:0000313|EMBL:EGF47076.1}; TaxID=947828 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus MTCC 5462.;"
methyltransferase
L3_114_000M1_scaffold_170_7
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5537..6364
DNA (828bp) protein (276aa)
Glutamine amidotransferase, class I n=2 Tax=Lactobacillus rhamnosus RepID=K8QDJ3_LACRH
Glutamine amidotransferase class I {ECO:0000313|EMBL:EKS53967.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
Glutamine amidotransferase, class I
L3_114_000M1_scaffold_170_8
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6451..7326)
DNA (876bp) protein (292aa)
Uncharacterized protein n=5 Tax=Lactobacillus rhamnosus RepID=C7TGN0_LACRL
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP73218.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_114_000M1_scaffold_170_9
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7326..7922)
DNA (597bp) protein (199aa)
Uncharacterized protein n=5 Tax=Lactobacillus rhamnosus RepID=C7TGN1_LACRL
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP73219.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_114_000M1_scaffold_170_10
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8229..9572
DNA (1344bp) protein (448aa)
Glutamine synthetase n=2 Tax=Lactobacillus rhamnosus RepID=B5QJQ2_LACRH
glnA; glutamine synthetase
Glutamine synthetase {ECO:0000313|EMBL:BAI41045.1}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
L3_114_000M1_scaffold_170_11
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9782..10924
DNA (1143bp) protein (381aa)
Metal-dependent hydrolase of the TIM-barrel fold protein n=2 Tax=Lactobacillus rhamnosus RepID=C7TGN3_LACRL
Nodulin/glutamate-ammonia ligase-like protein
Nodulin/glutamate-ammonia ligase-like protein {ECO:0000313|EMBL:AGP73222.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_114_000M1_scaffold_170_12
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10961..12316
DNA (1356bp) protein (452aa)
Amino acid transporter n=2 Tax=Lactobacillus rhamnosus RepID=B5QJQ0_LACRH
amino acid transporter protein
Amino acid transporter {ECO:0000313|EMBL:CAR86434.1}; Amino acid transporter protein {ECO:0000313|EMBL:BAI41047.1}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
L3_114_000M1_scaffold_170_13
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12350..12487)
DNA (138bp) protein (46aa)
Uncharacterized protein n=1 Tax=Lactobacillus rhamnosus LRHMDP2 RepID=K8QTZ1_LACRH
Uncharacterized protein {ECO:0000313|EMBL:EKS53973.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L3_114_000M1_scaffold_170_14
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12426..12851)
DNA (426bp) protein (142aa)
Transcriptional regulator, MerR family n=4 Tax=Lactobacillus rhamnosus RepID=C7TGN5_LACRL
MerR family transcriptional regulator
Transcriptional regulator, MerR family {ECO:0000313|EMBL:AGP73224.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_114_000M1_scaffold_170_15
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13029..13895
DNA (867bp) protein (289aa)
Oxidoreductase of aldo/keto reductase family n=2 Tax=Lactobacillus rhamnosus RepID=S4ZTK5_LACRH
Oxidoreductase of aldo/keto reductase family
Oxidoreductase of aldo/keto reductase family, subgroup 1 {ECO:0000313|EMBL:EKS53975.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L3_114_000M1_scaffold_170_16
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14074..15096)
DNA (1023bp) protein (341aa)
Alcohol dehydrogenase n=3 Tax=Lactobacillus rhamnosus RepID=S4ZTH1_LACRH
Alcohol dehydrogenase
Alcohol dehydrogenase {ECO:0000313|EMBL:CAR86437.1}; NADPH:quinone reductase {ECO:0000313|EMBL:BAI41050.1}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
L3_114_000M1_scaffold_170_17
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15199..15543
DNA (345bp) protein (115aa)
Transcriptional regulator n=11 Tax=Lactobacillus rhamnosus RepID=C8URP7_LACRG
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:BAI41051.1}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
L3_114_000M1_scaffold_170_18
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15617..16369)
DNA (753bp) protein (251aa)
Conserved integral membrane protein n=1 Tax=Lactobacillus rhamnosus (strain ATCC 53103 / GG) RepID=C7T9Z6_LACRG
putative transporter protein
Conserved integral membrane protein {ECO:0000313|EMBL:CAR86439.1}; Putative transporter protein {ECO:0000313|EMBL:BAI41052.1}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
L3_114_000M1_scaffold_170_19
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16599..17198)
DNA (600bp) protein (200aa)
Putative membrane protein n=2 Tax=Lactobacillus rhamnosus RepID=K8QJI9_LACRH
Putative membrane protein {ECO:0000313|EMBL:EKS53979.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
hypothetical protein
L3_114_000M1_scaffold_170_20
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17198..18628)
DNA (1431bp) protein (477aa)
Beta-glucosidase / 6-phospho-beta-glucosidase {ECO:0000313|EMBL:EKS53980.1}; EC=3.2.1.21 {ECO:0000313|EMBL:EKS53980.1};; EC=3.2.1.86 {ECO:0000313|EMBL:EKS53980.1};; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
Beta-glucosidase / 6-phospho-beta-glucosidase n=2 Tax=Lactobacillus rhamnosus RepID=K8QFF4_LACRH
yckE; Beta-glucosidase
L3_114_000M1_scaffold_170_21
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18629..19009)
DNA (381bp) protein (127aa)
PTS system cellobiose-specific IIA component {ECO:0000313|EMBL:EKS53981.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EKS53981.1};; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
PTS system cellobiose-specific IIA component (EC:2.7.1.69)
PTS system cellobiose-specific IIA component n=2 Tax=Lactobacillus rhamnosus RepID=K8QJH2_LACRH
L3_114_000M1_scaffold_170_22
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19074..20312)
DNA (1239bp) protein (413aa)
PTS system, cellobiose-specific IIC component n=2 Tax=Lactobacillus rhamnosus RepID=K8QBC1_LACRH
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
PTS system transporter subunit IIC
L3_114_000M1_scaffold_170_23
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20335..20646)
DNA (312bp) protein (104aa)
PTS system cellobiose-specific IIB component {ECO:0000313|EMBL:EKS53983.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EKS53983.1};; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
PTS system cellobiose-specific IIB component n=2 Tax=Lactobacillus rhamnosus RepID=K8QTZ9_LACRH
PTS system protein
L3_114_000M1_scaffold_170_24
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20810..22726
DNA (1917bp) protein (639aa)
Transcriptional antiterminator n=2 Tax=Lactobacillus rhamnosus RepID=K8QFF0_LACRH
Transcriptional antiterminator {ECO:0000313|EMBL:EKS53985.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
transcriptional activator
L3_114_000M1_scaffold_170_25
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23023..24252
DNA (1230bp) protein (410aa)
ABC transporter, permease protein n=4 Tax=Lactobacillus rhamnosus RepID=C7TGP0_LACRL
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP73230.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_114_000M1_scaffold_170_26
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

24378..25112
DNA (735bp) protein (245aa)
ABC-type uncharacterized transport system, ATPase component n=4 Tax=Lactobacillus rhamnosus RepID=B5QJG9_LACRH
natA; ABC transporter ATP-binding protein
ABC transporter, ATP binding protein {ECO:0000313|EMBL:CAR86441.1}; Putative multidrug ABC transporter ATP-binding component {ECO:0000313|EMBL:BAI41054.1}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
L3_114_000M1_scaffold_170_27
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

25105..26721
DNA (1617bp) protein (539aa)
Uncharacterized protein n=2 Tax=Lactobacillus rhamnosus RepID=K8QDH4_LACRH
Uncharacterized protein {ECO:0000313|EMBL:EKS53988.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
hypothetical protein
L3_114_000M1_scaffold_170_28
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26938..27618
DNA (681bp) protein (227aa)
DNA-binding response regulator, OmpR family (Rec-wHTH domains) n=6 Tax=Lactobacillus rhamnosus RepID=B5QJG7_LACRH
DNA-binding response regulator, OmpR family
DNA-binding response regulator, OmpR family (Rec-wHTH domains) {ECO:0000313|EMBL:EKS53989.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L3_114_000M1_scaffold_170_29
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

27606..28730
DNA (1125bp) protein (375aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
Two component sensor transduction histidine kinase n=4 Tax=Lactobacillus rhamnosus RepID=C7TGP4_LACRL
HAMP domain protein
L3_114_000M1_scaffold_170_30
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

28924..29823
DNA (900bp) protein (300aa)
ABC transporter ATPase n=1 Tax=Lactobacillus rhamnosus MTCC 5462 RepID=F3MXU7_LACRH
mppX; ABC transporter ATPase
ABC transporter ATPase {ECO:0000313|EMBL:EGF46974.1}; TaxID=947828 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus MTCC 5462.;"
Displaying items 1-30 of 50 in total

View Taxonomy
NameRatio
Lactobacillus rhamnosus
100.00%
Lactobacillus rhamnosus: 1Lactobacillus rhamnosus