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L3_114_123G1_scaffold_234

Search features with annotation key words

Displaying items 1-30 of 116 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_123G1_scaffold_234_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(61..486)
DNA (426bp) protein (142aa)
Competence/damage-inducible protein CinA protein n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3KZJ6_BIFBR
Competence-damage protein cinA
Competence/damage-inducible protein CinA domain {ECO:0000313|EMBL:EPD75418.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L3_114_123G1_scaffold_234_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(637..1272)
DNA (636bp) protein (212aa)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:AEF26559.1}; EC=2.7.8.5 {ECO:0000313|EMBL:AEF26559.1};; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=2 Tax=Bifidobacterium breve RepID=F6C908_BIFBA
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
L3_114_123G1_scaffold_234_3
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1451..4306)
DNA (2856bp) protein (952aa)
FtsK/SpoIIIE family protein n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BS68_BIFBR
ftsK; Cell division protein ftsK
Cell division protein FtsK {ECO:0000313|EMBL:BAR00224.1}; FtsK/SpoIIIE family protein {ECO:0000313|EMBL:EFE88281.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L3_114_123G1_scaffold_234_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4338..5267
DNA (930bp) protein (310aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=S2ZM19_BIFBR
Cell filamentation protein fic
Uncharacterized protein {ECO:0000313|EMBL:EPD75415.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L3_114_123G1_scaffold_234_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5404..6387)
DNA (984bp) protein (328aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
tRNA dimethylallyltransferase n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9Y1A0_BIFBU
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase
L3_114_123G1_scaffold_234_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6510..7961)
DNA (1452bp) protein (484aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2DYE6_BIFBR
tRNA 2-methylthioadenosine synthase
L3_114_123G1_scaffold_234_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8034..8834
DNA (801bp) protein (267aa)
RelA/SpoT domain protein n=5 Tax=Bifidobacterium breve RepID=F6C903_BIFBA
GTP pyrophosphokinase
RelA/SpoT domain protein {ECO:0000313|EMBL:AEF27239.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L3_114_123G1_scaffold_234_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8831..9802)
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZG93_BIFBR
Transporter, drug/metabolite exporter family
Uncharacterized protein {ECO:0000313|EMBL:BAR00229.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L3_114_123G1_scaffold_234_9
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9901..10722)
DNA (822bp) protein (274aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=F6C901_BIFBA
Hypothetical membrane spanning protein in uncharacterized protein family UPF0005
Hypothetical membrane spanning protein in uncharacterized protein family UPF0005 {ECO:0000313|EMBL:AHJ21360.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L3_114_123G1_scaffold_234_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10801..11586
DNA (786bp) protein (262aa)
Response regulator of two-component system n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3L0R9_BIFBR
LuxR family transcriptional regulator
Response regulator receiver domain protein {ECO:0000313|EMBL:EFE88274.1}; Two-component response regulator {ECO:0000313|EMBL:BAR00231.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L3_114_123G1_scaffold_234_11
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11649..12287
DNA (639bp) protein (213aa)
Acetyltransferase, GNAT family n=6 Tax=Bifidobacterium breve RepID=F6C8T0_BIFBA
Hypothetical protein in acetyl transferase family
Uncharacterized protein {ECO:0000313|EMBL:AHJ21362.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L3_114_123G1_scaffold_234_12
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12406..15105)
DNA (2700bp) protein (900aa)
Aconitate hydratase {ECO:0000256|RuleBase:RU361275}; Short=Aconitase {ECO:0000256|RuleBase:RU361275};; EC=4.2.1.3 {ECO:0000256|RuleBase:RU361275};; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Aconitate hydratase 1 n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BS59_BIFBR
Aconitate hydratase
L3_114_123G1_scaffold_234_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15224..17368)
DNA (2145bp) protein (715aa)
HAD ATPase, P-type, family IC n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZG87_BIFBR
Cation-transporting ATPase
HAD ATPase, P-type, family IC {ECO:0000313|EMBL:EPD75406.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L3_114_123G1_scaffold_234_14
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17636..18217)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CK44_BIFBR
putative secreted protein
Uncharacterized protein {ECO:0000313|EMBL:ERI84915.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L3_114_123G1_scaffold_234_15
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18232..19491)
DNA (1260bp) protein (420aa)
TRAM domain protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2DYF5_BIFBR
TRAM domain protein {ECO:0000313|EMBL:ERI84916.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
tRNA (Uracil-5-) -methyltransferase
L3_114_123G1_scaffold_234_16
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19481..20257)
DNA (777bp) protein (259aa)
Uncharacterized protein n=6 Tax=Bifidobacterium breve RepID=F6C8S5_BIFBA
putative membrane spanning protein
Uncharacterized protein {ECO:0000313|EMBL:AEF27188.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L3_114_123G1_scaffold_234_17
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20273..21118)
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CLG4_BIFBR
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERI84918.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L3_114_123G1_scaffold_234_18
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21243..22103
DNA (861bp) protein (287aa)
Exodeoxyribonuclease III n=6 Tax=Bifidobacterium breve RepID=F9Y1B3_BIFBU
Exodeoxyribonuclease III
Putative exodeoxyribonuclease {ECO:0000313|EMBL:BAR00239.1}; Putative exodeoxyribonuclease III {ECO:0000313|EMBL:EFE88266.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L3_114_123G1_scaffold_234_19
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22412..24421)
DNA (2010bp) protein (670aa)
Oligopeptide transport ATP-binding protein oppD n=2 Tax=Bifidobacterium breve RepID=F9Y1B4_BIFBU
Oligopeptide transport ATP-binding protein oppD {ECO:0000313|EMBL:ABE95880.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
Oligopeptide transport ATP-binding protein oppD
L3_114_123G1_scaffold_234_20
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24444..24551)
DNA (108bp) protein (36aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GQE4_BIFLS
putative oligopeptide ABC transporter, permease protein OppC
ABC transporter, permease protein {ECO:0000313|EMBL:EFM41930.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
L3_114_123G1_scaffold_234_21
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24494..25375)
DNA (882bp) protein (294aa)
ABC transporter, permease protein n=4 Tax=Bifidobacterium breve RepID=F6C8S1_BIFBA
oppC1; Oligopeptide transport system permease protein oppC
ABC transporter, permease protein {ECO:0000313|EMBL:EFE88264.1}; Dipeptide ABC transporter permease component {ECO:0000313|EMBL:BAR00241.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L3_114_123G1_scaffold_234_22
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25394..26320)
DNA (927bp) protein (309aa)
ABC transporter, permease protein n=5 Tax=Bifidobacterium breve RepID=F6C8S0_BIFBA
Oligopeptide transport system permease protein oppB
Oligopeptide transport system permease protein oppB {ECO:0000313|EMBL:ABE95882.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L3_114_123G1_scaffold_234_23
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26710..28350)
DNA (1641bp) protein (547aa)
ABC transporter, substrate-binding protein, family 5 n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CLG9_BIFBR
ABC transporter, substrate-binding protein, family 5 {ECO:0000313|EMBL:ERI84923.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Oligopeptide-binding protein oppA
L3_114_123G1_scaffold_234_24
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28604..29623)
DNA (1020bp) protein (340aa)
Tyrosine recombinase XerC n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2C383_BIFBR
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Integrase/recombinase
L3_114_123G1_scaffold_234_25
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29796..30608
DNA (813bp) protein (271aa)
ABC transporter, ATP-binding protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CK52_BIFBR
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KEY26577.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
ATP-binding protein of ABC transporter system
L3_114_123G1_scaffold_234_26
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30605..33463
DNA (2859bp) protein (953aa)
Efflux ABC transporter, permease protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2DYG3_BIFBR
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:ERI84926.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Permease protein of ABC transporter system
L3_114_123G1_scaffold_234_27
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33716..33979)
DNA (264bp) protein (88aa)
Uncharacterized protein n=4 Tax=Bifidobacterium breve RepID=H3L0Q3_BIFBR
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPD75393.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L3_114_123G1_scaffold_234_28
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34059..35075)
DNA (1017bp) protein (339aa)
Prephenate dehydrogenase {ECO:0000313|EMBL:AEF27720.1}; EC=1.3.1.12 {ECO:0000313|EMBL:AEF27720.1};; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
Prephenate dehydrogenase n=2 Tax=Bifidobacterium breve RepID=F6C8R4_BIFBA
Prephenate dehydrogenase
L3_114_123G1_scaffold_234_29
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35069..36040)
DNA (972bp) protein (324aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=S2ZG77_BIFBR
Prephenate dehydratase
Chorismate mutase {ECO:0000313|EMBL:KEY26581.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
L3_114_123G1_scaffold_234_30
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(36108..36572)
DNA (465bp) protein (155aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=D4BS42_BIFBR
putative membrane spanning protein
Putative membrane spanning protein {ECO:0000313|EMBL:AHJ21380.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
Displaying items 1-30 of 116 in total

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