ggKbase home page

L3_114_123G1_scaffold_350

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_123G1_scaffold_350_1
Granulicatella adiacens, Granulicatella, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(128..1480)
-----------------
DNA (1353bp)
protein (451aa)
HD domain protein n=1 Tax=Granulicatella adiacens ATCC 49175 RepID=C8NHS7_9LACT
HD domain protein {ECO:0000313|EMBL:EEW36740.1}; TaxID=638301 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Carnobacteriaceae; Granulicatella.;" source="Granulicatella adiacens ATCC 49175.;"
HD domain protein
L3_114_123G1_scaffold_350_2
Granulicatella adiacens, Granulicatella, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1609..2433)
-----------------
DNA (825bp)
protein (275aa)
Uncharacterized protein n=1 Tax=Granulicatella adiacens ATCC 49175 RepID=C8NHS6_9LACT
Uncharacterized protein {ECO:0000313|EMBL:EEW36739.1}; TaxID=638301 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Carnobacteriaceae; Granulicatella.;" source="Granulicatella adiacens ATCC 49175.;"
BH3822 protein
L3_114_123G1_scaffold_350_3
Granulicatella adiacens, Granulicatella, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2623..3315
-----------------
DNA (693bp)
protein (231aa)
Response regulator receiver domain protein n=1 Tax=Granulicatella adiacens ATCC 49175 RepID=C8NHS5_9LACT
Response regulator receiver domain protein {ECO:0000313|EMBL:EEW36738.1}; TaxID=638301 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Carnobacteriaceae; Granulicatella.;" source="Granulicatella adiacens ATCC 49175.;"
response regulator
L3_114_123G1_scaffold_350_4
Granulicatella adiacens, Granulicatella, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3455..4510
-----------------
DNA (1056bp)
protein (352aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=638301 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Carnobacteriaceae; Granulicatella.;" source="Granulicatella adiacens ATCC 49175.;"
hpk31; his Kinase A domain protein (EC:2.7.13.3)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Granulicatella adiacens ATCC 49175 RepID=C8NHS4_9LACT
L3_114_123G1_scaffold_350_5
Granulicatella adiacens, Granulicatella, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4599..5363
-----------------
DNA (765bp)
protein (255aa)
Exodeoxyribonuclease III {ECO:0000313|EMBL:EEW36736.1}; EC=3.1.11.2 {ECO:0000313|EMBL:EEW36736.1};; TaxID=638301 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Carnobacteriaceae; Granulicatella.;" source="Granulicatella adiacens ATCC 49175.;"
exoA; exodeoxyribonuclease III (EC:3.1.11.2)
Exodeoxyribonuclease III n=1 Tax=Granulicatella adiacens ATCC 49175 RepID=C8NHS3_9LACT
L3_114_123G1_scaffold_350_6
Granulicatella adiacens, Granulicatella, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5429..8272
-----------------
DNA (2844bp)
protein (948aa)
UvrABC system protein A n=1 Tax=Granulicatella adiacens ATCC 49175 RepID=C8NHS2_9LACT
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=638301 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Carnobacteriaceae; Granulicatella.;" source="Granulicatella adiacens ATCC 49175.;"
uvrA; excinuclease ABC subunit A
L3_114_123G1_scaffold_350_7
Granulicatella adiacens, Granulicatella, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8351..9019
-----------------
DNA (669bp)
protein (223aa)
Ribose-5-phosphate isomerase A {ECO:0000256|HAMAP-Rule:MF_00170, ECO:0000256|SAAS:SAAS00020824}; EC=5.3.1.6 {ECO:0000256|HAMAP-Rule:MF_00170, ECO:0000256|SAAS:SAAS00087684};; Phosphoriboisomerase A {ECO:0000256|HAMAP-Rule:MF_00170}; TaxID=638301 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Carnobacteriaceae; Granulicatella.;" source="Granulicatella adiacens ATCC 49175.;"
rpiA; ribose-5-phosphate isomerase A (EC:5.3.1.6)
Ribose-5-phosphate isomerase A n=1 Tax=Granulicatella adiacens ATCC 49175 RepID=C8NHS1_9LACT
L3_114_123G1_scaffold_350_8
Peptostreptococcus sp. MV1, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9070..9915)
-----------------
DNA (846bp)
protein (282aa)
KilA-N domain protein n=3 Tax=Lactobacillus iners RepID=E3BU38_9LACO
DNA-binding protein {ECO:0000313|EMBL:KGF10439.1}; TaxID=1219626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus.;" source="Peptostreptococcus sp. MV1.;"
KilA domain-containing protein
L3_114_123G1_scaffold_350_9
Granulicatella adiacens, Granulicatella, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10036..11022
-----------------
DNA (987bp)
protein (329aa)
Uncharacterized protein n=1 Tax=Granulicatella adiacens ATCC 49175 RepID=C8NHR9_9LACT
Uncharacterized protein {ECO:0000313|EMBL:EEW36732.1}; TaxID=638301 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Carnobacteriaceae; Granulicatella.;" source="Granulicatella adiacens ATCC 49175.;"
hypothetical protein
L3_114_123G1_scaffold_350_10
Granulicatella adiacens, Granulicatella, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11035..11226
-----------------
DNA (192bp)
protein (64aa)
Uncharacterized protein n=1 Tax=Granulicatella adiacens ATCC 49175 RepID=C8NHR8_9LACT
Uncharacterized protein {ECO:0000313|EMBL:EEW36731.1}; TaxID=638301 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Carnobacteriaceae; Granulicatella.;" source="Granulicatella adiacens ATCC 49175.;"
L3_114_123G1_scaffold_350_11
Granulicatella adiacens, Granulicatella, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11270..12331)
-----------------
DNA (1062bp)
protein (354aa)
Isopentenyl-diphosphate delta-isomerase {ECO:0000256|HAMAP-Rule:MF_00354}; Short=IPP isomerase {ECO:0000256|HAMAP-Rule:MF_00354};; EC=5.3.3.2 {ECO:0000256|HAMAP-Rule:MF_00354};; Isopentenyl diphosphate:dimethylallyl diphosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00354}; Isopentenyl pyrophosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00354}; Type 2 isopentenyl diphosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00354}; TaxID=638301 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Carnobacteriaceae; Granulicatella.;" source="Granulicatella adiacens ATCC 49175.;"
Isopentenyl-diphosphate delta-isomerase n=1 Tax=Granulicatella adiacens ATCC 49175 RepID=C8NHR7_9LACT
fni; isopentenyl-diphosphate delta-isomerase
L3_114_123G1_scaffold_350_12
Granulicatella adiacens, Granulicatella, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12344..13426)
-----------------
DNA (1083bp)
protein (361aa)
Phosphomevalonate kinase {ECO:0000313|EMBL:EEW36729.1}; EC=2.7.4.2 {ECO:0000313|EMBL:EEW36729.1};; TaxID=638301 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Carnobacteriaceae; Granulicatella.;" source="Granulicatella adiacens ATCC 49175.;"
Phosphomevalonate kinase n=1 Tax=Granulicatella adiacens ATCC 49175 RepID=C8NHR6_9LACT
phosphomevalonate kinase
L3_114_123G1_scaffold_350_13
Granulicatella adiacens, Granulicatella, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13431..14453)
-----------------
DNA (1023bp)
protein (341aa)
Diphosphomevalonate decarboxylase {ECO:0000313|EMBL:EEW36728.1}; EC=4.1.1.33 {ECO:0000313|EMBL:EEW36728.1};; TaxID=638301 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Carnobacteriaceae; Granulicatella.;" source="Granulicatella adiacens ATCC 49175.;"
Diphosphomevalonate decarboxylase n=1 Tax=Granulicatella adiacens ATCC 49175 RepID=C8NHR5_9LACT
mvaD; mevalonate diphosphate decarboxylase
L3_114_123G1_scaffold_350_14
Granulicatella adiacens, Granulicatella, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14450..15424)
-----------------
DNA (975bp)
protein (325aa)
Mevalonate kinase {ECO:0000313|EMBL:EEW36727.1}; EC=2.7.1.36 {ECO:0000313|EMBL:EEW36727.1};; TaxID=638301 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Carnobacteriaceae; Granulicatella.;" source="Granulicatella adiacens ATCC 49175.;"
Mevalonate kinase n=1 Tax=Granulicatella adiacens ATCC 49175 RepID=C8NHR4_9LACT
mevalonate kinase
L3_114_123G1_scaffold_350_15
Granulicatella adiacens, Granulicatella, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15595..16518
-----------------
DNA (924bp)
protein (308aa)
Pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_00215, ECO:0000256|RuleBase:RU003530}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_00215, ECO:0000256|RuleBase:RU003530};; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_00215}; TaxID=638301 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Carnobacteriaceae; Granulicatella.;" source="Granulicatella adiacens ATCC 49175.;"
Pantothenate kinase n=1 Tax=Granulicatella adiacens ATCC 49175 RepID=C8NHR3_9LACT
pantothenate kinase
L3_114_123G1_scaffold_350_16
Granulicatella adiacens, Granulicatella, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16932..17261
-----------------
DNA (330bp)
protein (110aa)
Uncharacterized protein n=1 Tax=Granulicatella adiacens ATCC 49175 RepID=C8NHR2_9LACT
Uncharacterized protein {ECO:0000313|EMBL:EEW36725.1}; TaxID=638301 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Carnobacteriaceae; Granulicatella.;" source="Granulicatella adiacens ATCC 49175.;"
hypothetical protein
L3_114_123G1_scaffold_350_17
Granulicatella adiacens, Granulicatella, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17268..17462
-----------------
DNA (195bp)
protein (65aa)
DNA-binding helix-turn-helix protein n=1 Tax=Granulicatella adiacens ATCC 49175 RepID=C8NHR1_9LACT
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EEW36724.1}; TaxID=638301 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Carnobacteriaceae; Granulicatella.;" source="Granulicatella adiacens ATCC 49175.;"
putative transcriptional regulator
L3_114_123G1_scaffold_350_18
Granulicatella adiacens, Granulicatella, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17637..18140
-----------------
DNA (504bp)
protein (168aa)
Uncharacterized protein n=1 Tax=Granulicatella adiacens ATCC 49175 RepID=C8NHR0_9LACT
Uncharacterized protein {ECO:0000313|EMBL:EEW36723.1}; TaxID=638301 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Carnobacteriaceae; Granulicatella.;" source="Granulicatella adiacens ATCC 49175.;"
protein-S-isoprenylcysteine methyltransferase
L3_114_123G1_scaffold_350_19
Gemella sanguinis, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18180..19043
-----------------
DNA (864bp)
protein (288aa)
Uncharacterized protein n=1 Tax=Gemella sanguinis M325 RepID=F3A8F7_9BACL
Uncharacterized protein {ECO:0000313|EMBL:EGF87597.1}; TaxID=562983 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella sanguinis M325.;"
metallo-beta-lactamase family protein
L3_114_123G1_scaffold_350_20
Granulicatella adiacens, Granulicatella, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19366..20919
-----------------
DNA (1554bp)
protein (518aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008786}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=638301 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Carnobacteriaceae; Granulicatella.;" source="Granulicatella adiacens ATCC 49175.;"
guaA; GMP synthase, N-terminal domain (EC:6.3.5.2)
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Granulicatella adiacens ATCC 49175 RepID=C8NHQ6_9LACT
L3_114_123G1_scaffold_350_21
Streptococcus oralis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21196..22539
-----------------
DNA (1344bp)
protein (448aa)
Uncharacterized protein n=1 Tax=Streptococcus oralis ATCC 49296 RepID=E6KIN3_STROR
Uncharacterized protein {ECO:0000313|EMBL:EFU64241.1}; TaxID=888049 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus oralis ATCC 49296.;"
hypothetical protein
L3_114_123G1_scaffold_350_22
Streptococcus sp. VT 162, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

22545..23264
-----------------
DNA (720bp)
protein (240aa)
Putative uncharacterized protein n=1 Tax=Streptococcus oralis (strain Uo5) RepID=F2QGZ7_STROU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHZ47113.1}; TaxID=1419814 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus sp. VT 162.;"
L3_114_123G1_scaffold_350_23
Streptococcus sp. VT 162, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23264..25921
-----------------
DNA (2658bp)
protein (886aa)
ATPase involved in DNA repair, putative n=1 Tax=Streptococcus oralis (strain Uo5) RepID=F2QGZ8_STROU
recombinase RecF
Recombinase RecF {ECO:0000313|EMBL:AHZ47114.1}; TaxID=1419814 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus sp. VT 162.;"
L3_114_123G1_scaffold_350_24
unknown

Not on your lists

26115..26216
-----------------
DNA (102bp)
protein (34aa)

This feature has no annotations

L3_114_123G1_scaffold_350_25
Lachnoanaerobaculum saburreum, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26437..26652
-----------------
DNA (216bp)
protein (72aa)
Cro/C1-type HTH DNA-binding domain protein n=1 Tax=Lachnoanaerobaculum saburreum F0468 RepID=I0RB85_9FIRM
Cro/C1-type HTH DNA-binding domain protein {ECO:0000313|EMBL:EIC96943.1}; TaxID=1095750 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum saburreum F0468.;"
hypothetical protein
L3_114_123G1_scaffold_350_26
Fusobacterium necrophorum, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

26645..27640
-----------------
DNA (996bp)
protein (332aa)
Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}; EC=2.1.1.37 {ECO:0000256|RuleBase:RU000417};; TaxID=1226633 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium necrophorum subsp. funduliforme B35.;"
Modification methylase HpaII n=1 Tax=Eubacterium brachy ATCC 33089 RepID=V1CJ54_9FIRM
DNA-cytosine methyltransferase
L3_114_123G1_scaffold_350_27
Lachnoanaerobaculum sp. MSX33, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27682..28767
-----------------
DNA (1086bp)
protein (362aa)
hpaIIR; Type II restriction endonuclease HpaII (EC:3.1.21.4)
Uncharacterized protein n=1 Tax=Clostridiales bacterium OBRC5-5 RepID=K0XJR5_9FIRM
HpaII restriction endonuclease {ECO:0000313|EMBL:ETO97429.1}; TaxID=936596 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. MSX33.;"
L3_114_123G1_scaffold_350_28
Granulicatella adiacens, Granulicatella, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

28849..29985
-----------------
DNA (1137bp)
protein (379aa)
Acyl-CoA dehydrogenase, C-terminal domain protein n=1 Tax=Granulicatella adiacens ATCC 49175 RepID=C8NHP3_9LACT
Acyl-CoA dehydrogenase, C-terminal domain protein {ECO:0000313|EMBL:EEW36706.1}; TaxID=638301 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Carnobacteriaceae; Granulicatella.;" source="Granulicatella adiacens ATCC 49175.;"
acyl-CoA dehydrogenase
L3_114_123G1_scaffold_350_29
Granulicatella adiacens, Granulicatella, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(30060..30599)
-----------------
DNA (540bp)
protein (180aa)
Transcriptional regulator, TetR family n=1 Tax=Granulicatella adiacens ATCC 49175 RepID=C8NHP2_9LACT
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EEW36705.1}; TaxID=638301 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Carnobacteriaceae; Granulicatella.;" source="Granulicatella adiacens ATCC 49175.;"
transcriptional regulator
L3_114_123G1_scaffold_350_30
Granulicatella adiacens, Granulicatella, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

30764..31645
-----------------
DNA (882bp)
protein (294aa)
Putative membrane protein n=1 Tax=Granulicatella adiacens ATCC 49175 RepID=C8NHP1_9LACT
Putative membrane protein {ECO:0000313|EMBL:EEW36704.1}; TaxID=638301 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Carnobacteriaceae; Granulicatella.;" source="Granulicatella adiacens ATCC 49175.;"
membrane protein
Displaying items 1-30 of 31 in total

View Taxonomy