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L3_114_123G1_scaffold_144

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_123G1_scaffold_144_1
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..511
DNA (510bp) protein (170aa)
Mannonate dehydratase {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414}; EC=4.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414};; D-mannonate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00106}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
uxuA; mannonate dehydratase (EC:4.2.1.8)
Mannonate dehydratase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HC99_9CLOT
L3_114_123G1_scaffold_144_2
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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530..1930
DNA (1401bp) protein (467aa)
Uronate isomerase {ECO:0000256|HAMAP-Rule:MF_00675, ECO:0000256|SAAS:SAAS00013440}; EC=5.3.1.12 {ECO:0000256|HAMAP-Rule:MF_00675, ECO:0000256|SAAS:SAAS00013438};; Glucuronate isomerase {ECO:0000256|HAMAP-Rule:MF_00675}; Uronic isomerase {ECO:0000256|HAMAP-Rule:MF_00675}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
uxaC; glucuronate isomerase (EC:5.3.1.12)
Uronate isomerase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H2E1_9CLOT
L3_114_123G1_scaffold_144_3
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2052..3440
DNA (1389bp) protein (463aa)
Sugar (Glycoside-Pentoside-Hexuronide) transporter n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H1T6_9CLOT
Sugar (Glycoside-Pentoside-Hexuronide) transporter {ECO:0000313|EMBL:EEH96704.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
uidB; glucuronide permease
L3_114_123G1_scaffold_144_4
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3514..5283
DNA (1770bp) protein (590aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
Glycosyl hydrolase family 3 protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QJI3_9CLOT
beta-hexosamidase A
L3_114_123G1_scaffold_144_5
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5556..8381
DNA (2826bp) protein (942aa)
UvrABC system protein A n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QIG7_9CLOT
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
uvrA; excinuclease ABC subunit A
L3_114_123G1_scaffold_144_6
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8455..8904
DNA (450bp) protein (150aa)
FHA domain protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QJ85_9CLOT
FHA domain protein {ECO:0000313|EMBL:EKY27740.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
forkhead-associated (FHA) domain-containing protein
L3_114_123G1_scaffold_144_7
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8991..10214
DNA (1224bp) protein (408aa)
Putative FtsW-like protein RodA n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9C7E3_9CLOT
Putative FtsW-like protein RodA {ECO:0000313|EMBL:EOR25203.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
cell cycle family protein
L3_114_123G1_scaffold_144_8
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10219..11772
DNA (1554bp) protein (518aa)
Penicillin-binding protein A family protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QJH9_9CLOT
Penicillin-binding protein A family protein {ECO:0000313|EMBL:EKY27737.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
penicillin-binding protein
L3_114_123G1_scaffold_144_9
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11974..13839
DNA (1866bp) protein (622aa)
UvrABC system protein C n=1 Tax=Clostridium sp. CAG:221 RepID=R6FV55_9CLOT
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
uvrC; UvrABC system protein C
L3_114_123G1_scaffold_144_10
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13918..14832
DNA (915bp) protein (305aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
murB; UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QI85_9CLOT
L3_114_123G1_scaffold_144_11
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14990..15874
DNA (885bp) protein (295aa)
UPF0042 nucleotide-binding protein HMPREF0216_01207 n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QID0_9CLOT
Nucleotide-binding protein HMPREF0216_01207 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
L3_114_123G1_scaffold_144_12
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15871..17196
DNA (1326bp) protein (442aa)
Putative gluconeogenesis factor n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QJH4_9CLOT
Putative gluconeogenesis factor {ECO:0000256|HAMAP-Rule:MF_00973}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
L3_114_123G1_scaffold_144_13
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17323..18273
DNA (951bp) protein (317aa)
Putative sporulation transcription regulator WhiA n=1 Tax=Clostridium sp. CAG:265 RepID=R6KGA1_9CLOT
Putative sporulation transcription regulator WhiA {ECO:0000256|HAMAP-Rule:MF_01420, ECO:0000256|SAAS:SAAS00005305}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:265.;"
hypothetical protein
L3_114_123G1_scaffold_144_14
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18299..19576
DNA (1278bp) protein (426aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
dnaE; DNA polymerase III, alpha subunit (EC:2.7.7.7)
DNA polymerase III, alpha subunit n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QI81_9CLOT
L3_114_123G1_scaffold_144_15

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19614..20435
DNA (822bp) protein (274aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8KHZ1_CLOBU
Mobile intron protein {ECO:0000313|EMBL:ETJ16589.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L3_114_123G1_scaffold_144_16
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20925..21296
DNA (372bp) protein (124aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
dnaE; DNA polymerase III, alpha subunit (EC:2.7.7.7)
DNA polymerase III, alpha subunit n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QI81_9CLOT
L3_114_123G1_scaffold_144_17
Lachnospiraceae bacterium TWA4, Clostridiales, Clostridia, Firmicutes, Bacteria

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22141..22398
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_37FAA RepID=E9RXN0_9FIRM
TWA4_scaffold00001, whole genome shotgun sequence {ECO:0000313|EMBL:KIR01950.1}; TaxID=1392836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium TWA4.;"
RNA-directed DNA polymerase
L3_114_123G1_scaffold_144_18
Lachnospiraceae bacterium TWA4, Clostridiales, Clostridia, Firmicutes, Bacteria

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22410..23999
DNA (1590bp) protein (530aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_37FAA RepID=E9RXN0_9FIRM
TWA4_scaffold00001, whole genome shotgun sequence {ECO:0000313|EMBL:KIR01950.1}; TaxID=1392836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium TWA4.;"
RNA-directed DNA polymerase
L3_114_123G1_scaffold_144_19
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

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24074..24349
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6QYS6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC27152.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
hypothetical protein
L3_114_123G1_scaffold_144_20
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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24489..26354
DNA (1866bp) protein (622aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
dnaE; DNA polymerase III, alpha subunit (EC:2.7.7.7)
DNA polymerase III, alpha subunit n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QI81_9CLOT
L3_114_123G1_scaffold_144_21
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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26846..27805
DNA (960bp) protein (320aa)
ATP-dependent 6-phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339}; Short=ATP-PFK {ECO:0000256|HAMAP-Rule:MF_00339};; Short=Phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339};; EC=2.7.1.11 {ECO:0000256|HAMAP-Rule:MF_00339};; Phosphohexokinase {ECO:0000256|HAMAP-Rule:MF_00339}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
pfkA; 6-phosphofructokinase (EC:2.7.1.11)
6-phosphofructokinase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QIC5_9CLOT
L3_114_123G1_scaffold_144_22
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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27873..29285
DNA (1413bp) protein (471aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
pyk; pyruvate kinase (EC:2.7.1.40)
Pyruvate kinase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QJG8_9CLOT
L3_114_123G1_scaffold_144_23
Geobacillus thermoleovorans, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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29605..29877
DNA (273bp) protein (91aa)
Uncharacterized protein n=2 Tax=Geobacillus RepID=T0NTE0_9BACI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV19166.1}; TaxID=1111068 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus; Geobacillus thermoleovorans group.;" source="Geobacillus thermoleovorans CCB_US3_UF5.;"
L3_114_123G1_scaffold_144_24
Desulfitobacterium metallireducens, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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29852..31768
DNA (1917bp) protein (639aa)
Putative uncharacterized protein n=1 Tax=Desulfitobacterium metallireducens DSM 15288 RepID=G6GFU0_9FIRM
insertion element protein
Insertion element protein {ECO:0000313|EMBL:AHF07946.1}; TaxID=871968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium metallireducens DSM 15288.;"
L3_114_123G1_scaffold_144_25
unknown

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comp(31886..32182)
DNA (297bp) protein (99aa)

This feature has no annotations

L3_114_123G1_scaffold_144_26
Paenibacillus barengoltzii, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(32299..33009)
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Paenibacillus barengoltzii G22 RepID=R9L522_9BACL
Uncharacterized protein {ECO:0000313|EMBL:EOS53516.1}; TaxID=1235795 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus barengoltzii G22.;"
hypothetical protein
L3_114_123G1_scaffold_144_27
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(33033..33356)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9XWD6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY99931.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
hypothetical protein
L3_114_123G1_scaffold_144_28
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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34138..35517
DNA (1380bp) protein (460aa)
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QIF3_9CLOT
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:EKY27726.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
RNA methyltransferase
L3_114_123G1_scaffold_144_29
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35768..36340
DNA (573bp) protein (191aa)
Putative dihydroxyacetone kinase regulator n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QME2_9CLOT
Putative dihydroxyacetone kinase regulator {ECO:0000313|EMBL:EKY29111.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
TetR family transcriptional regulator
L3_114_123G1_scaffold_144_30
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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36666..38081
DNA (1416bp) protein (472aa)
Radical SAM domain protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QM85_9CLOT
Radical SAM domain protein {ECO:0000313|EMBL:EKY29109.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
radical SAM protein
Displaying items 1-30 of 44 in total

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