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L3_114_123G1_scaffold_178

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_123G1_scaffold_178_1
unknown

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comp(48..167)
DNA (120bp) protein (40aa)

This feature has no annotations

L3_114_123G1_scaffold_178_2
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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348..905
DNA (558bp) protein (186aa)
Response regulator receiver protein n=1 Tax=Clostridium sp. CAG:265 RepID=R6KL85_9CLOT
Response regulator receiver protein {ECO:0000313|EMBL:CDB74260.1}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:265.;"
two-component response regulator, CheY-like domain protein
L3_114_123G1_scaffold_178_3
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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951..1886
DNA (936bp) protein (312aa)
Response regulator receiver protein n=1 Tax=Clostridium sp. CAG:265 RepID=R6KL85_9CLOT
Response regulator receiver protein {ECO:0000313|EMBL:CDB74260.1}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:265.;"
two-component response regulator, CheY-like domain protein
L3_114_123G1_scaffold_178_4
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1886..3685
DNA (1800bp) protein (600aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:265.;"
Putative two-component sensor kinase YesM n=1 Tax=Clostridium sp. CAG:265 RepID=R6KSX9_9CLOT
yesM1; putative two-component sensor kinase YesM
L3_114_123G1_scaffold_178_5
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3703..4404
DNA (702bp) protein (234aa)
Putative integral membrane protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TI21_9CLOT
Putative integral membrane protein {ECO:0000313|EMBL:EKQ50895.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
hypothetical protein
L3_114_123G1_scaffold_178_6
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4453..5181)
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H3Z6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98959.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
glycerophosphoryl diester phosphodiesterase family protein
L3_114_123G1_scaffold_178_7
Turicibacter sanguinis, Turicibacter, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(5205..5990)
DNA (786bp) protein (262aa)
Cof-like hydrolase n=1 Tax=Turicibacter sanguinis PC909 RepID=D4W3H4_9FIRM
Cof-like hydrolase {ECO:0000313|EMBL:EFF64539.1}; TaxID=702450 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Turicibacter.;" source="Turicibacter sanguinis PC909.;"
Putative bifunctional phosphatase/peptidyl-prolyl cis-trans isomerase
L3_114_123G1_scaffold_178_8
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6023..7363)
DNA (1341bp) protein (447aa)
Bacterial extracellular solute-binding protein n=2 Tax=Turicibacter RepID=D4W3H3_9FIRM
bacterial extracellular solute-binding family protein
Bacterial extracellular solute-binding family protein {ECO:0000313|EMBL:AIY85001.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_114_123G1_scaffold_178_9
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7403..8227)
DNA (825bp) protein (275aa)
ABC transporter, permease protein n=1 Tax=Turicibacter sanguinis PC909 RepID=D4W3H2_9FIRM
binding--dependent transport system inner membrane component family protein
Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:AIY83246.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_114_123G1_scaffold_178_10
Turicibacter sanguinis, Turicibacter, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(8227..9162)
DNA (936bp) protein (312aa)
ABC transporter, permease protein n=2 Tax=Turicibacter RepID=D4W3H1_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:EFF64536.1}; TaxID=702450 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Turicibacter.;" source="Turicibacter sanguinis PC909.;"
binding--dependent transport system inner membrane component family protein
L3_114_123G1_scaffold_178_11
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9375..11354)
DNA (1980bp) protein (660aa)
Efflux ABC transporter, permease protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QK50_9CLOT
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EKY28301.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
putative membrane protein
L3_114_123G1_scaffold_178_12
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11344..12114)
DNA (771bp) protein (257aa)
Putative bacteriocin export ABC transporter n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QL82_9CLOT
Putative bacteriocin export ABC transporter {ECO:0000313|EMBL:EKY28302.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
bceA; Bacitracin export ATP-binding protein BceA
L3_114_123G1_scaffold_178_13
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12295..12696
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QK18_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY28303.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
L3_114_123G1_scaffold_178_14
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12757..13299)
DNA (543bp) protein (181aa)
Acetyltransferase, GNAT family n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QJZ8_9CLOT
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EKY28304.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
GNAT family acetyltransferase
L3_114_123G1_scaffold_178_15
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13320..14330)
DNA (1011bp) protein (337aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
Putative phage head-tail adaptor n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QKU7_9CLOT
hypothetical protein
L3_114_123G1_scaffold_178_16
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14327..15037)
DNA (711bp) protein (237aa)
Putative response regulator protein GraR n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QK53_9CLOT
Putative response regulator protein GraR {ECO:0000313|EMBL:EKY28306.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
L3_114_123G1_scaffold_178_17
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15146..15994)
DNA (849bp) protein (283aa)
Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SL01_CLOC7
AraC family transcriptional regulator {ECO:0000313|EMBL:KJU72237.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
cupin domain protein
L3_114_123G1_scaffold_178_18
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16145..17887
DNA (1743bp) protein (581aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H6H1_9CLOT
ABC transporter family protein
ABC transporter family protein {ECO:0000313|EMBL:AIY84202.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_114_123G1_scaffold_178_19
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17888..19669
DNA (1782bp) protein (594aa)
ABC transporter n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CFU0_9CLOT
ABC transporter {ECO:0000313|EMBL:EOR28167.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
ABC transporter family protein
L3_114_123G1_scaffold_178_20
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20385..22511
DNA (2127bp) protein (709aa)
Arylsulfatase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QKV0_9CLOT
Arylsulfatase {ECO:0000313|EMBL:EKY28310.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
sulfatase
L3_114_123G1_scaffold_178_21
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22558..23271)
DNA (714bp) protein (238aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
Pseudouridine synthase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QK59_9CLOT
pseudouridine synthase
L3_114_123G1_scaffold_178_22
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23401..24270)
DNA (870bp) protein (290aa)
Cation diffusion facilitator family transporter n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QL91_9CLOT
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:EKY28312.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
cation efflux protein
L3_114_123G1_scaffold_178_23
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24495..25718)
DNA (1224bp) protein (408aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H2J8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH97580.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
noxA; nitrate reductase, NADH oxidase subunit
L3_114_123G1_scaffold_178_24
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25718..26131)
DNA (414bp) protein (138aa)
Nitrate reductase, electron transfer subunit n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QKV5_9CLOT
Nitrate reductase, electron transfer subunit {ECO:0000313|EMBL:EKY28315.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
narB; nitrate reductase electron transfer subunit
L3_114_123G1_scaffold_178_25
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26141..28219)
DNA (2079bp) protein (693aa)
narA; nitrate reductase, catalytic subunit (EC:1.7.99.4)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HDQ7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH97578.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
L3_114_123G1_scaffold_178_26
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28460..29155)
DNA (696bp) protein (232aa)
PHP domain protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QK68_9CLOT
PHP domain protein {ECO:0000313|EMBL:EKY28321.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
phosphotransferase domain-containing protein
L3_114_123G1_scaffold_178_27
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(29261..29620)
DNA (360bp) protein (120aa)
50S ribosomal protein L20 n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QLA0_9CLOT
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
rplT; ribosomal protein L20
L3_114_123G1_scaffold_178_28
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(29647..29844)
DNA (198bp) protein (66aa)
50S ribosomal protein L35 n=2 Tax=Clostridium RepID=L1QK35_9CLOT
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
50S ribosomal protein L35
L3_114_123G1_scaffold_178_29
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29865..30386)
DNA (522bp) protein (174aa)
Translation initiation factor IF-3 n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QK11_9CLOT
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
infC; translation initiation factor IF-3
L3_114_123G1_scaffold_178_30
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30619..31584)
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QKW5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY28325.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
DNA methylase N-4/N-6 domain protein
Displaying items 1-30 of 50 in total

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