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L3_114_123G1_scaffold_279

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_123G1_scaffold_279_1
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..100
DNA (99bp) protein (33aa)
Putative uncharacterized protein n=1 Tax=Desulfitobacterium hafniense (strain Y51) RepID=Q24RZ6_DESHY
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAE85196.1}; TaxID=138119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium hafniense (strain Y51).;"
L3_114_123G1_scaffold_279_2
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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240..1667
DNA (1428bp) protein (476aa)
Cardiolipin synthase {ECO:0000256|HAMAP-Rule:MF_01916}; Short=CL synthase {ECO:0000256|HAMAP-Rule:MF_01916};; EC=2.7.8.- {ECO:0000256|HAMAP-Rule:MF_01916};; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
cls1; cardiolipin synthase Cls (EC:2.7.8.-)
Cardiolipin synthase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QFG5_9CLOT
L3_114_123G1_scaffold_279_3
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1765..1920
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QER0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY26421.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
L3_114_123G1_scaffold_279_4
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2076..3089
DNA (1014bp) protein (338aa)
aroF1; phospho-2-dehydro-3-deoxyheptonate aldolase AroF (EC:2.5.1.54)
3-deoxy-7-phosphoheptulonate synthase n=1 Tax=Clostridium sp. CAG:221 RepID=R6FLM8_9CLOT
3-deoxy-7-phosphoheptulonate synthase {ECO:0000313|EMBL:CDB14183.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
L3_114_123G1_scaffold_279_5
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3185..4234
DNA (1050bp) protein (350aa)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
aroB; 3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EIP4_9CLOT
L3_114_123G1_scaffold_279_6
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4248..5543
DNA (1296bp) protein (432aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|SAAS:SAAS00240549}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|SAAS:SAAS00240533};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QFG9_9CLOT
3-phosphoshikimate 1-carboxyvinyltransferase
L3_114_123G1_scaffold_279_7
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5521..6648
DNA (1128bp) protein (376aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
aroC; chorismate synthase AroC (EC:4.2.3.5)
Chorismate synthase n=1 Tax=Clostridium sp. CAG:221 RepID=R6FYS9_9CLOT
L3_114_123G1_scaffold_279_8
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6671..7843
DNA (1173bp) protein (391aa)
Chorismate mutase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QEM5_9CLOT
Chorismate mutase {ECO:0000313|EMBL:EKY26428.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
chorismate mutase
L3_114_123G1_scaffold_279_9
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7945..8760
DNA (816bp) protein (272aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
Shikimate dehydrogenase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QEK7_9CLOT
aroE; shikimate dehydrogenase
L3_114_123G1_scaffold_279_10
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8771..9268
DNA (498bp) protein (166aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
Shikimate kinase n=1 Tax=Clostridium sp. CAG:221 RepID=R6FXX6_9CLOT
shikimate kinase
L3_114_123G1_scaffold_279_11
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9377..10390
DNA (1014bp) protein (338aa)
aroF; phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54)
3-deoxy-7-phosphoheptulonate synthase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QES0_9CLOT
3-deoxy-7-phosphoheptulonate synthase {ECO:0000313|EMBL:EKY26431.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
L3_114_123G1_scaffold_279_12
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10498..11331
DNA (834bp) protein (278aa)
Prephenate dehydrogenase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QFR2_9CLOT
Prephenate dehydrogenase {ECO:0000313|EMBL:EKY26432.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
prephenate dehydrogenase
L3_114_123G1_scaffold_279_13
Clostridium sp. CAG:273, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11616..12113
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:273 RepID=R7L2T0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE82989.1}; TaxID=1262789 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:273.;"
hypothetical protein
L3_114_123G1_scaffold_279_14
Eubacterium sp. CAG:115, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12140..13303
DNA (1164bp) protein (388aa)
Beta-lactamase n=1 Tax=Eubacterium sp. CAG:115 RepID=R5L8U4_9FIRM
Beta-lactamase {ECO:0000313|EMBL:CCY73829.1}; TaxID=1262878 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:115.;"
putative Beta-lactamase
L3_114_123G1_scaffold_279_15
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13481..14452
DNA (972bp) protein (324aa)
Polysaccharide deacetylase family protein n=1 Tax=Clostridium sp. CAG:265 RepID=R6KVZ0_9CLOT
Polysaccharide deacetylase family protein {ECO:0000313|EMBL:CDB74076.1}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:265.;"
polysaccharide deacetylase
L3_114_123G1_scaffold_279_16
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14658..15683
DNA (1026bp) protein (342aa)
Polysaccharide deacetylase family protein n=1 Tax=Clostridium sp. CAG:265 RepID=R6KVZ0_9CLOT
Polysaccharide deacetylase family protein {ECO:0000313|EMBL:CDB74076.1}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:265.;"
polysaccharide deacetylase
L3_114_123G1_scaffold_279_17
Paenibacillus riograndensis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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15856..16233
DNA (378bp) protein (126aa)
CopY family transcriptional regulator n=1 Tax=Paenibacillus daejeonensis RepID=UPI0003824839
transcriptional repressor, CopY family
Transcriptional repressor, CopY family {ECO:0000313|EMBL:CQR55382.1}; TaxID=1073571 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus riograndensis SBR5.;"
L3_114_123G1_scaffold_279_18
Brevibacillus panacihumi, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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16243..17388
DNA (1146bp) protein (382aa)
Peptidase M56 n=1 Tax=Brevibacillus panacihumi W25 RepID=V6M3D5_9BACL
Peptidase M56 {ECO:0000313|EMBL:EST52852.1}; TaxID=1408254 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus panacihumi W25.;"
peptidase M56 BlaR1
L3_114_123G1_scaffold_279_19
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17483..18040)
DNA (558bp) protein (186aa)
Adenylate cyclase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QEL3_9CLOT
Adenylate cyclase {ECO:0000313|EMBL:EKY26434.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
adenylate cyclase
L3_114_123G1_scaffold_279_20
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18257..18619
DNA (363bp) protein (121aa)
Transcriptional regulator, GntR family n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QKV9_9CLOT
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EKY28207.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
GntR family transcriptional regulator
L3_114_123G1_scaffold_279_21
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18624..19496
DNA (873bp) protein (291aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QJT3_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EKY28206.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
ABC transporter ATP-binding protein
L3_114_123G1_scaffold_279_22
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19498..20244
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CBT7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOR26480.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
hypothetical protein
L3_114_123G1_scaffold_279_23
Clostridium scatologenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20331..20879
DNA (549bp) protein (183aa)
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI000312203F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKA69347.1}; TaxID=1548 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium scatologenes.;"
L3_114_123G1_scaffold_279_24
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20953..22308)
DNA (1356bp) protein (452aa)
Transporter, dicarboxylate/amino acid:cation Na+/H+ symporter family protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QEN5_9CLOT
Transporter, dicarboxylate/amino acid:cation Na+/H+ symporter family protein {ECO:0000313|EMBL:EKY26438.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
sodium:dicarboxylate symporter family protein
L3_114_123G1_scaffold_279_25
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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22722..22907
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QEL7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY26439.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
L3_114_123G1_scaffold_279_26
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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23218..24087
DNA (870bp) protein (290aa)
aroE3; shikimate dehydrogenase AroE (EC:1.1.1.25)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Shikimate dehydrogenase n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MQK4_CLOSA
L3_114_123G1_scaffold_279_27
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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24197..24643
DNA (447bp) protein (149aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169};; Type II DHQase {ECO:0000256|HAMAP-Rule:MF_00169}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
3-dehydroquinate dehydratase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QFS1_9CLOT
3-dehydroquinate dehydratase
L3_114_123G1_scaffold_279_28
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24837..26840
DNA (2004bp) protein (668aa)
NADH oxidase (EC:1.-.-.-)
Putative NADH oxidase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QEP0_9CLOT
Putative NADH oxidase {ECO:0000313|EMBL:EKY26443.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
L3_114_123G1_scaffold_279_29
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(26988..28013)
DNA (1026bp) protein (342aa)
Regulatory protein n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JJ71_CELLD
regulatory protein
Regulatory protein {ECO:0000313|EMBL:ADZ84364.1}; Flags: Precursor;; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L3_114_123G1_scaffold_279_30
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28029..28916)
DNA (888bp) protein (296aa)
L-serine dehydratase, iron-sulfur-dependent subunit alpha (EC:4.3.1.17)
L-serine dehydratase iron-sulfur-dependent alpha subunit n=1 Tax=Clostridium sp. CAG:221 RepID=R6GNK0_9CLOT
L-serine dehydratase iron-sulfur-dependent alpha subunit {ECO:0000313|EMBL:CDB15742.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
Displaying items 1-30 of 39 in total

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