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L3_114_123G1_scaffold_364

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_123G1_scaffold_364_1
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

248..1165
DNA (918bp) protein (306aa)
ycsN; oxidoreductase YcsN (EC:1.-.-.-)
Oxidoreductase, aldo/keto reductase family protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QB03_9CLOT
Oxidoreductase, aldo/keto reductase family protein {ECO:0000313|EMBL:EKY25136.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
L3_114_123G1_scaffold_364_2
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1392..2573
DNA (1182bp) protein (394aa)
Transporter, major facilitator family protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QBZ5_9CLOT
Transporter, major facilitator family protein {ECO:0000313|EMBL:EKY25132.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
major facilitator family transporter
L3_114_123G1_scaffold_364_3
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2643..5243)
DNA (2601bp) protein (867aa)
ATP-dependent chaperone protein ClpB n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QAZ8_9CLOT
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
clpB; ATP-dependent chaperone ClpB
L3_114_123G1_scaffold_364_4
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5446..7512
DNA (2067bp) protein (689aa)
Transcriptional regulator, AraC family n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QBR5_9CLOT
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EKY25130.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
transcriptional regulatory protein
L3_114_123G1_scaffold_364_5
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7851..9110)
DNA (1260bp) protein (420aa)
Tetratricopeptide repeat protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QAX4_9CLOT
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EKY25129.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
tetratricopeptide repeat protein
L3_114_123G1_scaffold_364_6
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9127..10428)
DNA (1302bp) protein (434aa)
Tetratricopeptide repeat/DNA binding domain-containing protein n=1 Tax=Clostridium sp. CAG:221 RepID=R6FRL1_9CLOT
Tetratricopeptide repeat/DNA binding domain-containing protein {ECO:0000313|EMBL:CDB15853.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
helix-turn-helix family protein
L3_114_123G1_scaffold_364_7
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10595..10777)
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QAZ3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY25126.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
L3_114_123G1_scaffold_364_8
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10864..11508)
DNA (645bp) protein (215aa)
Ribonuclease HI n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QBQ9_9CLOT
Ribonuclease HI {ECO:0000313|EMBL:EKY25125.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
ribonuclease H-related protein
L3_114_123G1_scaffold_364_9
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11528..12487)
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QAX1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY25124.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
L3_114_123G1_scaffold_364_10
[Clostridium] hiranonis, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12686..13495)
DNA (810bp) protein (270aa)
Lipoprotein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6FWR0_9FIRM
Lipoprotein {ECO:0000256|PIRNR:PIRNR002854}; TaxID=500633 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] hiranonis DSM 13275.;"
metQ; D-methionine ABC transporter substrate-binding protein
L3_114_123G1_scaffold_364_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13613..14269)
DNA (657bp) protein (219aa)
Binding--dependent transport system inner membrane component family protein n=207 Tax=Clostridium difficile RepID=C9XT41_CLODC
metI; D-methionine ABC transporter permease
Putative D-methionine ABC transporter, permease protein {ECO:0000313|EMBL:CBE03823.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
L3_114_123G1_scaffold_364_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14271..15230)
DNA (960bp) protein (320aa)
metN; ABC-type transport system, methionine-specificATP-binding protein (EC:3.6.3.-)
Methionine import ATP-binding protein MetN {ECO:0000256|HAMAP-Rule:MF_01719}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01719};; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
ABC transporter family protein n=19 Tax=Clostridium difficile RepID=T2TML4_CLODI
L3_114_123G1_scaffold_364_13
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15684..15971)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QAX0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY25118.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
L3_114_123G1_scaffold_364_14
Clostridium scatologenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16159..16368)
DNA (210bp) protein (70aa)
N-acetyltransferase GCN5 n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BU74_9CLOT
GCN5-related N-acetyltransferase
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:AKA67835.1}; TaxID=1548 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium scatologenes.;"
L3_114_123G1_scaffold_364_15
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16397..17689)
DNA (1293bp) protein (431aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QBX8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY25117.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
L3_114_123G1_scaffold_364_16
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17682..18176)
DNA (495bp) protein (165aa)
Putative RNA polymerase sigma factor SigV n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QAY4_9CLOT
Putative RNA polymerase sigma factor SigV {ECO:0000313|EMBL:EKY25116.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
L3_114_123G1_scaffold_364_17
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18348..18656)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QBP7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY25115.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
L3_114_123G1_scaffold_364_18
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18743..19126)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CEQ2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOR27772.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
hypothetical protein
L3_114_123G1_scaffold_364_19
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19147..19803)
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Clostridium intestinale URNW RepID=U2NIJ7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KJU72534.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
hypothetical protein
L3_114_123G1_scaffold_364_20
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19809..20324)
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C8R4_9FIRM
Peptidase M56, BlaR1 domain protein {ECO:0000313|EMBL:AIY80465.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
peptidase M56, BlaR1
L3_114_123G1_scaffold_364_21
Geobacillus sp. G1w1, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20391..20600)
DNA (210bp) protein (70aa)
DNA-binding protein n=2 Tax=Paenibacillus RepID=C6IX26_9BACL
XRE family transcriptional regulator {ECO:0000313|EMBL:KFX33635.1}; TaxID=1430331 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacillus sp. G1w1.;"
XRE family transcriptional regulator
L3_114_123G1_scaffold_364_22
Desulfosporosinus sp. OT, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20615..21064)
DNA (450bp) protein (150aa)
Putative membrane protein n=1 Tax=Desulfosporosinus sp. OT RepID=G2FXM8_9FIRM
Putative membrane protein {ECO:0000313|EMBL:EGW37587.1}; TaxID=913865 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. OT.;"
hypothetical protein
L3_114_123G1_scaffold_364_23
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21183..22376)
DNA (1194bp) protein (398aa)
Stage V sporulation protein E n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HDJ8_9CLOT
Stage V sporulation protein E {ECO:0000313|EMBL:EEH97497.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
spoVE2; stage V sporulation protein E
L3_114_123G1_scaffold_364_24
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22401..24611)
DNA (2211bp) protein (737aa)
Stage V sporulation protein D n=1 Tax=Clostridium sp. CAG:221 RepID=R6GNY1_9CLOT
Stage V sporulation protein D {ECO:0000313|EMBL:CDB15867.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
stage V sporulation protein D
L3_114_123G1_scaffold_364_25
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25000..26376)
DNA (1377bp) protein (459aa)
Transporter, dicarboxylate/amino acid:cation Na+/H+ symporter family protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QBW8_9CLOT
Transporter, dicarboxylate/amino acid:cation Na+/H+ symporter family protein {ECO:0000313|EMBL:EKY25107.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
sodium:dicarboxylate symporter family protein
L3_114_123G1_scaffold_364_26
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26450..26881)
DNA (432bp) protein (144aa)
Putative HTH-type transcriptional regulator IscR n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QAX9_9CLOT
Putative HTH-type transcriptional regulator IscR {ECO:0000313|EMBL:EKY25106.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
transcriptional regulator, BadM/Rrf2 family
L3_114_123G1_scaffold_364_27
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27050..27703)
DNA (654bp) protein (218aa)
HAD hydrolase, family IA, variant 3 n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QBN6_9CLOT
HAD hydrolase, family IA, variant 3 {ECO:0000313|EMBL:EKY25105.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
L3_114_123G1_scaffold_364_28
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27915..28856)
DNA (942bp) protein (314aa)
Periplasmic binding protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QAU4_9CLOT
Periplasmic binding protein {ECO:0000313|EMBL:EKY25094.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
ferric siderophore ABC transporter,substrate-binding protein
L3_114_123G1_scaffold_364_29
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28965..29720)
DNA (756bp) protein (252aa)
iron-chelate-transporting ATPase (EC:3.6.3.34)
Putative ferrichrome ABC transporter, ATP-binding protein FhuC n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QAV0_9CLOT
Putative ferrichrome ABC transporter, ATP-binding protein FhuC {ECO:0000313|EMBL:EKY25093.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
L3_114_123G1_scaffold_364_30
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29717..30673)
DNA (957bp) protein (319aa)
Iron chelate uptake ABC transporter, FeCT family, permease protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QBV3_9CLOT
Iron chelate uptake ABC transporter, FeCT family, permease protein {ECO:0000313|EMBL:EKY25092.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
iron chelate uptake ABC transporter permease
Displaying items 1-30 of 31 in total

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