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L3_114_123G1_scaffold_442

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_123G1_scaffold_442_1
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..76)
DNA (75bp) protein (25aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H297_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH96558.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
L3_114_123G1_scaffold_442_2
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(216..650)
DNA (435bp) protein (145aa)
Nucleoside triphosphatase YtkD n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HC00_9CLOT
Nucleoside triphosphatase YtkD {ECO:0000313|EMBL:EEH96557.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
NUDIX hydrolase
L3_114_123G1_scaffold_442_3
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(831..1904)
DNA (1074bp) protein (358aa)
Sporulation integral membrane protein YtvI n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HEH0_9CLOT
Sporulation integral membrane protein YtvI {ECO:0000313|EMBL:EEH96556.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
sporulation integral membrane protein YtvI
L3_114_123G1_scaffold_442_4
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2202..2816)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H6B1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH96555.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
L3_114_123G1_scaffold_442_5
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2995..3387)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H1Q7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH96554.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
L3_114_123G1_scaffold_442_6
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3484..4239)
DNA (756bp) protein (252aa)
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H296_9CLOT
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase {ECO:0000313|EMBL:EEH96553.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
mannose-6-phosphate isomerase family protein
L3_114_123G1_scaffold_442_7
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4363..5916)
DNA (1554bp) protein (518aa)
Site-specific recombinase, DNA invertase Pin n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CFM0_9CLOT
Site-specific recombinase, DNA invertase Pin {ECO:0000313|EMBL:EOR28078.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
pin; site-specific recombinase, DNA invertase Pin
L3_114_123G1_scaffold_442_8
unknown

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comp(5918..6097)
DNA (180bp) protein (60aa)

This feature has no annotations

L3_114_123G1_scaffold_442_9
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6243..7718)
DNA (1476bp) protein (492aa)
L-fucose isomerase related protein n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6M2F9_CLOB8
L-fucose isomerase-like protein
L-fucose isomerase related protein {ECO:0000313|EMBL:ABR36789.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
L3_114_123G1_scaffold_442_10
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7791..9788)
DNA (1998bp) protein (666aa)
tkt2; transketolase Tkt (EC:2.2.1.1)
Transketolase {ECO:0000256|RuleBase:RU004996}; EC=2.2.1.1 {ECO:0000256|RuleBase:RU004996};; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
Transketolase n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1LYQ4_9CLOT
L3_114_123G1_scaffold_442_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9818..10468)
DNA (651bp) protein (217aa)
Probable transaldolase {ECO:0000256|HAMAP-Rule:MF_00494}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00494};; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
tal; putative transaldolase Tal (EC:2.2.1.2)
Probable transaldolase n=2 Tax=Clostridium butyricum RepID=B1R1N2_CLOBU
L3_114_123G1_scaffold_442_12
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10510..11622)
DNA (1113bp) protein (371aa)
mro; aldose 1-epimerase Mro (EC:5.1.3.3)
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
Aldose 1-epimerase n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1LYT3_9CLOT
L3_114_123G1_scaffold_442_13
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11736..13844)
DNA (2109bp) protein (703aa)
Methyl-accepting chemotaxis protein TlpB n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MDH6_9CLOT
tlpB1; methyl-accepting chemotaxis protein TlpB
Methyl-accepting chemotaxis protein TlpB {ECO:0000313|EMBL:AGF54448.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L3_114_123G1_scaffold_442_14
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14008..15135)
DNA (1128bp) protein (376aa)
Two component transcriptional regulator, AraC family n=1 Tax=Clostridium sp. DL-VIII RepID=G7M200_9CLOT
Two component transcriptional regulator, AraC family {ECO:0000313|EMBL:EHI98633.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
response regulator
L3_114_123G1_scaffold_442_15
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15149..15946)
DNA (798bp) protein (266aa)
Response regulator receiver protein n=2 Tax=Clostridium RepID=A6M388_CLOB8
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:ABR37068.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
L3_114_123G1_scaffold_442_16
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15963..17723)
DNA (1761bp) protein (587aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
yesM2; sensor histidine kinase YesM (EC:2.7.13.3)
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Clostridium sp. DL-VIII RepID=G7M7N6_9CLOT
L3_114_123G1_scaffold_442_17
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17728..18981)
DNA (1254bp) protein (418aa)
Extracellular solute-binding protein, family 1 n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6M390_CLOB8
extracellular solute-binding protein
Extracellular solute-binding protein, family 1 {ECO:0000313|EMBL:ABR37070.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
L3_114_123G1_scaffold_442_18
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19233..20267)
DNA (1035bp) protein (345aa)
sugar ABC transporter substrate-binding protein n=1 Tax=Clostridium beijerinckii RepID=UPI00031276CF
ABC-type sugar transport system periplasmic component-like protein {ECO:0000313|EMBL:AJH02092.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
ABC-type sugar transport system periplasmic component-like protein
L3_114_123G1_scaffold_442_19
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20320..21309)
DNA (990bp) protein (330aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Clostridium sp. DL-VIII RepID=G7LX84_9CLOT
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:EHI96746.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
monosaccharide-transporting ATPase
L3_114_123G1_scaffold_442_20
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21326..22798)
DNA (1473bp) protein (491aa)
ABC transporter related n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6M394_CLOB8
ABC transporter
ABC transporter related {ECO:0000313|EMBL:ABR37074.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
L3_114_123G1_scaffold_442_21
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23001..25133)
DNA (2133bp) protein (711aa)
Glycoside hydrolase, family 3 domain protein n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6M2F2_CLOB8
Glycoside hydrolase, family 3 domain protein {ECO:0000313|EMBL:ABR36782.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
glycoside hydrolase family 3 protein
L3_114_123G1_scaffold_442_22
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25445..26230
DNA (786bp) protein (262aa)
DNA-binding protein n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8FZ86_CLOPA
helix-turn-helix domain-containing protein
DNA-binding protein {ECO:0000313|EMBL:ETD69003.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
L3_114_123G1_scaffold_442_23
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26455..26637)
DNA (183bp) protein (61aa)
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H296_9CLOT
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase {ECO:0000313|EMBL:EEH96553.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
Mannose-1-phosphate guanylyltransferase (GDP)
Displaying 23 items

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