ggKbase home page

L3_114_123G1_scaffold_805

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_123G1_scaffold_805_1
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..110)
DNA (108bp) protein (36aa)
UviB-like protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BU23_9CLOT
UviB-like protein {ECO:0000313|EMBL:EOR20573.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
UviB-like protein
L3_114_123G1_scaffold_805_2
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(169..306)
DNA (138bp) protein (46aa)
Uncharacterized protein n=2 Tax=Clostridium botulinum B RepID=B2TNU5_CLOBB
Phage uncharacterized protein, XkdX family,Phage uncharacterised protein (Phage_XkdX) {ECO:0000313|EMBL:CEK34312.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
hypothetical protein
L3_114_123G1_scaffold_805_3
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(307..696)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BTV4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CEK29423.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
L3_114_123G1_scaffold_805_4
Eubacterium acidaminophilum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(707..1354)
DNA (648bp) protein (216aa)
putative phage tail fiber protein
Putative phage tail fiber protein {ECO:0000313|EMBL:AHM56421.1}; TaxID=1286171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium acidaminophilum DSM 3953.;"
L3_114_123G1_scaffold_805_5
Eubacterium acidaminophilum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1371..2300)
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J2D2_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHM56420.1}; TaxID=1286171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium acidaminophilum DSM 3953.;"
L3_114_123G1_scaffold_805_6
unknown

Not on your lists

comp(2314..2574)
DNA (261bp) protein (87aa)

This feature has no annotations

L3_114_123G1_scaffold_805_7
Eubacterium acidaminophilum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2585..3376)
DNA (792bp) protein (264aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHM56418.1}; TaxID=1286171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium acidaminophilum DSM 3953.;"
L3_114_123G1_scaffold_805_8
Eubacterium acidaminophilum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3373..4413)
DNA (1041bp) protein (347aa)
Phage protein n=2 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=M4Y4K6_CLOSH
baseplate J family protein
Baseplate J family protein {ECO:0000313|EMBL:AHM56417.1}; TaxID=1286171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium acidaminophilum DSM 3953.;"
L3_114_123G1_scaffold_805_9
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4413..4805)
DNA (393bp) protein (131aa)
Phage-like element PBSX protein, XkdS n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VLQ5_CLOSH
hypothetical protein
Tax=BJP_IG2157_Clostridiales_35_16
L3_114_123G1_scaffold_805_10
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4802..5032)
DNA (231bp) protein (77aa)
Phage protein n=1 Tax=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) RepID=G2JCD1_CLOTH
phage protein
Phage protein {ECO:0000313|EMBL:AEO12453.1}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 /; NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium; thermocellum).;"
L3_114_123G1_scaffold_805_11
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5029..5970)
DNA (942bp) protein (314aa)
Phage protein n=1 Tax=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) RepID=A3DIB3_CLOTH
hypothetical protein
Phage protein {ECO:0000313|EMBL:ABN53692.1}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 /; NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium; thermocellum).;"
L3_114_123G1_scaffold_805_12
[Clostridium] stercorarium, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5967..6629)
DNA (663bp) protein (221aa)
LysM domain-containing protein n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VPE8_CLOSH
LysM domain-containing protein
Peptidoglycan-binding lysin domain-containing protein {ECO:0000313|EMBL:AGC67443.1}; TaxID=1121335 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM; 8532 / NCIMB 11754).;"
L3_114_123G1_scaffold_805_13
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6629..8497)
DNA (1869bp) protein (623aa)
Phage tape measure protein n=1 Tax=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) RepID=A3DIB1_CLOTH
phage tape measure protein
Phage tape measure protein {ECO:0000313|EMBL:ABN53690.1}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 /; NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium; thermocellum).;"
L3_114_123G1_scaffold_805_14
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8499..8678)
DNA (180bp) protein (60aa)
Putative uncharacterized protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R929_CLOSW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL04004.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L3_114_123G1_scaffold_805_15
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8681..9166)
DNA (486bp) protein (162aa)
XkdN-like protein n=1 Tax=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) RepID=A3DIB0_CLOTH
hypothetical protein
XkdN-like protein {ECO:0000313|EMBL:ABN53689.1}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 /; NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium; thermocellum).;"
L3_114_123G1_scaffold_805_16
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9170..9646)
DNA (477bp) protein (159aa)
XkdM protein, phage-like element PBSX n=1 Tax=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) RepID=A3DIA9_CLOTH
hypothetical protein
XkdM protein, phage-like element PBSX {ECO:0000313|EMBL:ABN53688.1}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 /; NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium; thermocellum).;"
L3_114_123G1_scaffold_805_17
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9662..10699)
DNA (1038bp) protein (346aa)
Phage tail sheath protein n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VPE2_CLOSH
phage tail sheath protein
Tax=BJP_IG2157_Clostridiales_35_16
L3_114_123G1_scaffold_805_18
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10706..11119)
DNA (414bp) protein (138aa)
Putative uncharacterized protein n=1 Tax=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) RepID=A3DIA6_CLOTH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABN53685.1}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 /; NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium; thermocellum).;"
L3_114_123G1_scaffold_805_19
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11109..11525)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Clostridium thermocellum JW20 RepID=D1NQI7_CLOTM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABN53684.1}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 /; NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium; thermocellum).;"
L3_114_123G1_scaffold_805_20
[Clostridium] stercorarium, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11522..11854)
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VHC8_CLOSH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGC67435.1}; TaxID=1121335 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM; 8532 / NCIMB 11754).;"
L3_114_123G1_scaffold_805_21
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11851..12192)
DNA (342bp) protein (114aa)
Bacteriophage QLRG family, putative DNA packaging n=1 Tax=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) RepID=A3DIA3_CLOTH
hypothetical protein
Bacteriophage QLRG family, putative DNA packaging {ECO:0000313|EMBL:ABN53682.1}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 /; NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium; thermocellum).;"
L3_114_123G1_scaffold_805_22
unknown

Not on your lists

comp(12222..12389)
DNA (168bp) protein (56aa)

This feature has no annotations

L3_114_123G1_scaffold_805_23
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12399..13250)
DNA (852bp) protein (284aa)
Uncharacterized protein n=2 Tax=Anaerostipes RepID=B0MB51_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC34409.1}; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
head protein
L3_114_123G1_scaffold_805_24
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13271..13870)
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FN90_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDG02104.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
methyl-accepting chemotaxis protein scaffolding protein
L3_114_123G1_scaffold_805_25
unknown

Not on your lists

comp(14158..14271)
DNA (114bp) protein (38aa)

This feature has no annotations

Displaying 25 items

View Taxonomy