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L3_114_237G1_scaffold_27

Search features with annotation key words

Displaying items 1-30 of 90 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_237G1_scaffold_27_1
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..289)
DNA (288bp) protein (96aa)
Probable transaldolase {ECO:0000256|HAMAP-Rule:MF_00494}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00494};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
fructose-6-phosphate aldolase, TalC/MipB family (EC:2.2.1.2)
Probable transaldolase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JDR6_CLOBU
L3_114_237G1_scaffold_27_2
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(341..1249)
DNA (909bp) protein (303aa)
D-ribose-binding protein n=3 Tax=Clostridium butyricum RepID=B1R1N3_CLOBU
Ribose ABC transport system, periplasmic ribose-binding protein RbsB {ECO:0000313|EMBL:KJZ84140.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
ribose ABC transporter periplasmicD-ribose-binding protein
L3_114_237G1_scaffold_27_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1376..2308)
DNA (933bp) protein (311aa)
UPI0003D5FECE related cluster n=1 Tax=unknown RepID=UPI0003D5FECE
Ribose transport system permease protein RbsC {ECO:0000313|EMBL:ETI87677.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
rbsC; ribose ABC transporter permease
L3_114_237G1_scaffold_27_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2329..3837)
DNA (1509bp) protein (503aa)
Ribose import ATP-binding protein RbsA {ECO:0000256|HAMAP-Rule:MF_01716}; EC=3.6.3.17 {ECO:0000256|HAMAP-Rule:MF_01716};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
Ribose import ATP-binding protein RbsA n=3 Tax=Clostridium butyricum RepID=B1R1N5_CLOBU
ABC transporter related protein
L3_114_237G1_scaffold_27_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3851..4246)
DNA (396bp) protein (132aa)
D-ribose pyranase {ECO:0000256|HAMAP-Rule:MF_01661, ECO:0000256|SAAS:SAAS00011477}; EC=5.4.99.62 {ECO:0000256|HAMAP-Rule:MF_01661, ECO:0000256|SAAS:SAAS00166232};; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
D-ribose pyranase n=2 Tax=Clostridium butyricum RepID=M8JF31_CLOBU
D-ribose pyranase
L3_114_237G1_scaffold_27_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4263..5180)
DNA (918bp) protein (306aa)
Ribokinase n=2 Tax=Clostridium butyricum RepID=M8JDR0_CLOBU
Ribokinase {ECO:0000313|EMBL:ENZ32262.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
rbsK; ribokinase
L3_114_237G1_scaffold_27_7
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5508..5684)
DNA (177bp) protein (59aa)
UPI0003D67CDB related cluster n=1 Tax=unknown RepID=UPI0003D67CDB
Uncharacterized protein {ECO:0000313|EMBL:KJZ92153.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
hypothetical protein
L3_114_237G1_scaffold_27_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5905..8055)
DNA (2151bp) protein (717aa)
Ferrous iron transport protein B n=2 Tax=Clostridium butyricum RepID=M8J504_CLOBU
Ferrous iron transporter B {ECO:0000313|EMBL:ENZ32264.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
ferrous iron transport protein B
L3_114_237G1_scaffold_27_9
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8173..8394)
DNA (222bp) protein (74aa)
Ferrous iron transport protein A n=3 Tax=Clostridium butyricum RepID=C4IBY1_CLOBU
Ferrous iron transport protein A {ECO:0000313|EMBL:KJZ84157.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L3_114_237G1_scaffold_27_10
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8429..8638)
DNA (210bp) protein (70aa)
Putative ferrous iron transport protein n=2 Tax=Clostridium butyricum RepID=B1R0R7_CLOBU
Putative ferrous iron transport protein {ECO:0000313|EMBL:KJZ84162.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
FeoA family protein
L3_114_237G1_scaffold_27_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8887..10224
DNA (1338bp) protein (446aa)
UPI0003D69676 related cluster n=1 Tax=unknown RepID=UPI0003D69676
Uncharacterized protein {ECO:0000313|EMBL:ETI87685.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
Histidine kinase, HAMP region:chemotaxis sensory transducer precursor
L3_114_237G1_scaffold_27_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10524..11420
DNA (897bp) protein (299aa)
Permease, DMT family n=2 Tax=Clostridium butyricum RepID=B1R0R5_CLOBU
Permease, DMT family {ECO:0000313|EMBL:EEP56513.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
protein of unknown function DUF6 transmembrane
L3_114_237G1_scaffold_27_13
unknown

Not on your lists

comp(11400..11543)
DNA (144bp) protein (48aa)

This feature has no annotations

L3_114_237G1_scaffold_27_14
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11488..12546)
DNA (1059bp) protein (353aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=R0AHM7_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ84028.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
two-component sensor histidine kinase
L3_114_237G1_scaffold_27_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12572..13255)
DNA (684bp) protein (228aa)
Two-component system response regulator n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YXY0_CLOBU
Two-component system response regulator {ECO:0000313|EMBL:ENZ32270.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
regulatory protein VanR
L3_114_237G1_scaffold_27_16
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13370..15346)
DNA (1977bp) protein (659aa)
Beta-lactamase {ECO:0000313|EMBL:KJZ84017.1}; EC=3.5.2.6 {ECO:0000313|EMBL:KJZ84017.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YXD4_CLOBU
beta-lactamase
L3_114_237G1_scaffold_27_17
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15623..15997)
DNA (375bp) protein (125aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1R0R1_CLOBU
Putative regulator of the mannose operon, ManO {ECO:0000313|EMBL:KJZ84037.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L3_114_237G1_scaffold_27_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16202..17113)
DNA (912bp) protein (304aa)
IIDman n=4 Tax=Clostridium butyricum RepID=B1R0R0_CLOBU
PTS system, mannose/fructose/sorbose family, IID component {ECO:0000313|EMBL:ENZ32273.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
PTS system mannose/fructose/sorbose family transporter subunit IID
L3_114_237G1_scaffold_27_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17132..17938)
DNA (807bp) protein (269aa)
Fructose permease iic component n=2 Tax=Clostridium butyricum RepID=B1R0Q9_CLOBU
PTS system sorbose-specific iic component {ECO:0000313|EMBL:EEP55960.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
PTS system sorbose-specific transporter subunit IIC
L3_114_237G1_scaffold_27_20
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17972..18949)
DNA (978bp) protein (326aa)
PTS system, mannose-specific IIB component/PTS system, mannose-specific IIA component {ECO:0000313|EMBL:KJZ84034.1}; EC=2.7.1.69 {ECO:0000313|EMBL:KJZ84034.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
Pts system mannose-specific eiiab component n=4 Tax=Clostridium butyricum RepID=B1R0Q8_CLOBU
PTS system sorbose subfamily transporter subunit IIB
L3_114_237G1_scaffold_27_21
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19508..20644)
DNA (1137bp) protein (379aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YXD6_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ32276.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
copper amine oxidase family protein,putative cell wall binding protein
L3_114_237G1_scaffold_27_22
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20859..21296
DNA (438bp) protein (146aa)
MarR-family transcriptional regulator n=2 Tax=Clostridium butyricum RepID=M8K0K8_CLOBU
Transcriptional regulator, MarR family {ECO:0000313|EMBL:KJZ84046.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
MarR family transcriptional regulator
L3_114_237G1_scaffold_27_23
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21338..21976)
DNA (639bp) protein (213aa)
UPI0003AA5D49 related cluster n=1 Tax=unknown RepID=UPI0003AA5D49
Nitroreductase family protein {ECO:0000313|EMBL:ETI87696.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
nitroreductase
L3_114_237G1_scaffold_27_24
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22211..25312)
DNA (3102bp) protein (1034aa)
Acriflavin resistance protein n=2 Tax=Clostridium butyricum RepID=M8J4Y3_CLOBU
RND multidrug efflux transporter Acriflavin resistance protein {ECO:0000313|EMBL:KJZ84006.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
nolG3; nodulation protein NolG
L3_114_237G1_scaffold_27_25
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25325..26611)
DNA (1287bp) protein (429aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JF81_CLOBU
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ENZ32280.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
RND family efflux transporter MFP subunit
L3_114_237G1_scaffold_27_26
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26783..27976
DNA (1194bp) protein (398aa)
UPI0003D5D381 related cluster n=1 Tax=unknown RepID=UPI0003D5D381
Uncharacterized protein {ECO:0000313|EMBL:KJZ84055.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
integral membrane sensor signal transduction histidine kinase
L3_114_237G1_scaffold_27_27
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28066..28716
DNA (651bp) protein (217aa)
Transcriptional regulatory protein DegU n=2 Tax=Clostridium butyricum RepID=B1R0Q1_CLOBU
Fructose response regulator of fruA and EII fructose/mannose {ECO:0000313|EMBL:KJZ84059.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
two component transcriptional regulator, LuxR family
L3_114_237G1_scaffold_27_28
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28842..29717)
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A778_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ93305.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
RpiR family transcriptional regulator
L3_114_237G1_scaffold_27_29
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30090..30827
DNA (738bp) protein (246aa)
deoxyribose-phosphate aldolase (EC:4.1.2.4)
Deoxyribose-phosphate aldolase n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AHP0_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ93315.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
L3_114_237G1_scaffold_27_30
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31097..31933)
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YXY7_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ87780.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
putative short-chain dehydrogenase
Displaying items 1-30 of 90 in total

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