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L3_114_237G1_scaffold_39

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Displaying items 1-30 of 94 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_237G1_scaffold_39_1
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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256..567
DNA (312bp) protein (104aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1R2H2_CLOBU
Anti-sigma factor {ECO:0000313|EMBL:KJZ85523.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypothetical protein
L3_114_237G1_scaffold_39_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

750..2357
DNA (1608bp) protein (536aa)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
pyrG; CTP synthase PyrG (EC:6.3.4.2)
CTP synthase n=4 Tax=Clostridium butyricum RepID=B1R2H3_CLOBU
L3_114_237G1_scaffold_39_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2640..4175
DNA (1536bp) protein (512aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
rho; transcription termination factor Rho (EC:3.6.4.-)
Transcription termination factor Rho n=2 Tax=Clostridium butyricum RepID=B1R2H4_CLOBU
L3_114_237G1_scaffold_39_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4211..5332)
DNA (1122bp) protein (374aa)
ugtP; processive diacylglycerol glucosyltransferase UgtP (EC:2.4.1.-)
Monogalactosyldiacylglycerol synthase n=3 Tax=Clostridium butyricum RepID=C4IEE5_CLOBU
Monogalactosyldiacylglycerol synthase {ECO:0000313|EMBL:EEP55681.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
L3_114_237G1_scaffold_39_5
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(5534..5743)
DNA (210bp) protein (70aa)
50S ribosomal protein L31 n=4 Tax=Clostridium butyricum RepID=B1R2H6_CLOBU
50S ribosomal protein L31 {ECO:0000256|HAMAP-Rule:MF_00501, ECO:0000256|SAAS:SAAS00004482}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
rpmE; 50S ribosomal protein L31
L3_114_237G1_scaffold_39_6

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6155..6742
DNA (588bp) protein (196aa)
tdk; thymidine kinase Tdk (EC:2.7.1.21)
Thymidine kinase n=4 Tax=Clostridium butyricum RepID=B1R2H7_CLOBU
Thymidine kinase {ECO:0000313|EMBL:ETJ16452.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_114_237G1_scaffold_39_7
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6764..8521
DNA (1758bp) protein (586aa)
Modification methylase, HemK family n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KAH3_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ85485.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
prmC; release factor glutamine methyltransferase PrmC
L3_114_237G1_scaffold_39_8
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8756..9838
DNA (1083bp) protein (361aa)
Peptide chain release factor 1 n=4 Tax=Clostridium butyricum RepID=B1R2H9_CLOBU
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
prfA; peptide chain release factor 1
L3_114_237G1_scaffold_39_9

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9908..10540
DNA (633bp) protein (211aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1R2I0_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ETJ16455.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L3_114_237G1_scaffold_39_10
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10559..11608
DNA (1050bp) protein (350aa)
Threonylcarbamoyl-AMP synthase {ECO:0000256|PIRNR:PIRNR004930}; Short=TC-AMP synthase {ECO:0000256|PIRNR:PIRNR004930};; EC=2.7.7.87 {ECO:0000256|PIRNR:PIRNR004930};; L-threonylcarbamoyladenylate synthase {ECO:0000256|PIRNR:PIRNR004930}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
Sua5/YciO/YrdC/YwlC family protein n=4 Tax=Clostridium butyricum RepID=B1R2I1_CLOBU
ywlC; tRNA threonylcarbamoyladenosine biosynthesis protein YwlC
L3_114_237G1_scaffold_39_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11629..12078
DNA (450bp) protein (150aa)
Ribose 5-phosphate isomerase B {ECO:0000313|EMBL:EEP55618.1}; EC=5.3.1.6 {ECO:0000313|EMBL:EEP55618.1};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
ywlF1; putative sugar phosphate isomerase YwlF (EC:5.3.1.-)
Ribose 5-phosphate isomerase B n=4 Tax=Clostridium butyricum RepID=B1R2I2_CLOBU
L3_114_237G1_scaffold_39_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12217..12846
DNA (630bp) protein (210aa)
Uracil phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084530}; EC=2.4.2.9 {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084480};; UMP pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_01218}; UPRTase {ECO:0000256|HAMAP-Rule:MF_01218}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
upp; uracil phosphoribosyltransferase Upp (EC:2.4.2.9)
Uracil phosphoribosyltransferase n=4 Tax=Clostridium butyricum RepID=B1R2I3_CLOBU
L3_114_237G1_scaffold_39_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12865..13359
DNA (495bp) protein (165aa)
dctD; deoxycytidylate deaminase DctD (EC:3.5.4.12)
Deoxycytidylate deaminase n=4 Tax=Clostridium butyricum RepID=B1R2I4_CLOBU
CMP/dCMP deaminase, zinc-binding {ECO:0000313|EMBL:EEP55486.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
L3_114_237G1_scaffold_39_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13456..14604
DNA (1149bp) protein (383aa)
putative UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14)
UDP-N-acetylglucosamine 2-epimerase n=4 Tax=Clostridium butyricum RepID=B1R2I5_CLOBU
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:ENZ31222.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
L3_114_237G1_scaffold_39_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14840..16021
DNA (1182bp) protein (394aa)
Thiolase n=5 Tax=Clostridium butyricum RepID=A6N8U2_CLOBU
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:ENZ31221.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
acetyl-CoA acetyltransferase
L3_114_237G1_scaffold_39_16
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16880..17239
DNA (360bp) protein (120aa)
ATP synthase F0, I subunit n=2 Tax=Clostridium butyricum RepID=M8K284_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ85516.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypothetical protein
L3_114_237G1_scaffold_39_17

Not on your lists

17249..17938
DNA (690bp) protein (230aa)
ATP synthase subunit a n=4 Tax=Clostridium butyricum RepID=B1R2I8_CLOBU
ATP synthase subunit a {ECO:0000313|EMBL:ETJ20328.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
atpB; ATP synthase subunit a
L3_114_237G1_scaffold_39_18
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17970..18185
DNA (216bp) protein (72aa)
atpE; F-ATPase, F0 complex, subunit C AtpE (EC:3.6.3.14)
ATP synthase F0, C subunit n=4 Tax=Clostridium butyricum RepID=B1R2I9_CLOBU
ATP synthase subunit c {ECO:0000256|SAAS:SAAS00242779}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
L3_114_237G1_scaffold_39_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18237..18716
DNA (480bp) protein (160aa)
ATP synthase subunit b n=4 Tax=Clostridium butyricum RepID=B1R2J0_CLOBU
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
F0F1 ATP synthase subunit B
L3_114_237G1_scaffold_39_20
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18719..19258
DNA (540bp) protein (180aa)
atpH; F0F1 ATP synthase subunit delta (EC:3.6.3.14)
ATP synthase subunit delta n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YUH6_CLOBU
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
L3_114_237G1_scaffold_39_21
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19269..20783
DNA (1515bp) protein (505aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
atpA1; ATP synthase subunit alpha (EC:3.6.3.14)
ATP synthase subunit alpha n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YUW6_CLOBU
L3_114_237G1_scaffold_39_22

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20959..21807
DNA (849bp) protein (283aa)
ATP synthase gamma chain n=4 Tax=Clostridium butyricum RepID=B1R2J3_CLOBU
ATP synthase gamma chain {ECO:0000313|EMBL:ETJ16469.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
atpG; ATP synthase gamma chain
L3_114_237G1_scaffold_39_23
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21824..23215
DNA (1392bp) protein (464aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
atpD1; ATP synthase subunit beta (EC:3.6.3.14)
ATP synthase subunit beta n=4 Tax=Clostridium butyricum RepID=B1R2J4_CLOBU
L3_114_237G1_scaffold_39_24
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23230..23631
DNA (402bp) protein (134aa)
ATP synthase epsilon chain n=4 Tax=Clostridium butyricum RepID=B1R2J5_CLOBU
ATP synthase epsilon chain {ECO:0000256|HAMAP-Rule:MF_00530}; ATP synthase F1 sector epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; F-ATPase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
atpC; ATP synthase epsilon chain
L3_114_237G1_scaffold_39_25
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23888..24529
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YUH1_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ31211.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
L3_114_237G1_scaffold_39_26
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24552..25814
DNA (1263bp) protein (421aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
murA2; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2 (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=2 Tax=Clostridium butyricum RepID=B1R2J7_CLOBU
L3_114_237G1_scaffold_39_27
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26069..27139
DNA (1071bp) protein (357aa)
Stage II sporulation protein D n=2 Tax=Clostridium butyricum RepID=B1R2J8_CLOBU
Stage II sporulation protein D (SpoIID) {ECO:0000313|EMBL:KJZ84945.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
sporulation stage II protein D
L3_114_237G1_scaffold_39_28
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27629..28390
DNA (762bp) protein (254aa)
M23 peptidase domain protein n=4 Tax=Clostridium butyricum RepID=B1R2J9_CLOBU
Stage II sporulation protein {ECO:0000313|EMBL:KJZ84950.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
metalloendopeptidase-like membrane protein
L3_114_237G1_scaffold_39_29

Not on your lists

28546..28803
DNA (258bp) protein (86aa)
Stage III sporulation protein D n=5 Tax=Clostridium RepID=U5ML74_CLOSA
Sporulation stage III, transcriptional regulator SpoIIID {ECO:0000313|EMBL:ETJ16476.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
spoIIID2; stage III sporulation protein D
L3_114_237G1_scaffold_39_30
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28880..29914
DNA (1035bp) protein (345aa)
Mbl protein n=2 Tax=Clostridium butyricum RepID=M8KAF6_CLOBU
MreB/Mrl family cell shape determining protein {ECO:0000313|EMBL:ENZ31206.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
mbl; MreB-like protein Mbl
Displaying items 1-30 of 94 in total

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